Shinella oryzae: K6301_04415
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Entry
K6301_04415 CDS
T08112
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
soj
Shinella oryzae
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
K6301_04415
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
HHH_7
YqgF
T2SSK
S1_RRP5
HHH_6
DUF460
HHH
RNase_II_C_S1
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
UPA25450
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Position
898045..900354
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AA seq
769 aa
AA seq
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MAPTPLKIANLIATEIKATAAQVTAAVELIDEGATVPFIARYRKEVTGGLDDTQLRTLAE
RLAYLRELEARRASILDSIAGQGKLTDELSARIAAVTTKAELEDIYLPYKPKRRTKAEIA
RERGLGPLAEQILADRALVPAELAEKFVSADVPDVKAALEGARDIVAEQLTENADLLKRL
RNYMKDNAFLRSRVVEGKQEAGAKFSDYFDHTERWATVPGHRALAMLRGWNEEFLSVDIV
VDQDSTEPVKPVERIIASFYAVGTRPGDKWLADVIGWTWRVKLSMSLSLDLMREMRERSE
EEAIRVFARNLKDLLLAAPAGTRATMGLDPGIRTGVKVAVVDNTGKVVETTTVYPFPPKN
DVRGTQAELAALIRKHKVELISIGNGTGSRETEKLVADLLAQLPAPKPTKVIVSEAGASV
YSASETAAAEFPNLDVSLRGAVSIARRLQDPLAELVKIEPKSIGVGQYQHDVDQSKLSRS
LDAVVEDAVNAVGVDLNTASAPLLARVSGLGKSSAEAIVAHRDANGPFESRKELMKVARL
GARTFEQCAGFLRIPNGKEPLDASSVHPEAYGVAKKIVAACGRDLRALMGDSAALKQLDP
KLFVDERFGLPTVKDILAELEKPGRDPRPEFKTATFADGIDDIKDLKPGMLLEGTVTNVA
AFGAFVDIGVHQDGLVHVSQLADRFVKDPHEVVKAGDVVKVRVTEVDVPRKRIGLTMRKD
GAAAAPRDNAARNDRNTQMKPKFSQAAPKQQATSQGAFGAALAEAMKKK
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggccccgaccccgctcaagatcgcgaacctgatcgccacggagatcaaggcaaccgcc
gcgcaggtgacggcggccgtcgaactgatcgacgagggcgcgacggttcccttcattgcc
cgttaccgcaaggaagtgaccggcgggctcgacgatacccagctgcgcacgctcgccgaa
cggctcgcctacctgcgcgaactggaagcccgccgcgcgtccatcctcgattccatcgcg
gggcagggcaagctgaccgacgagctgtccgcccgaatcgccgccgtcaccaccaaggcc
gagcttgaggatatctatcttccctacaagccgaagcgccgcaccaaggcggaaatcgcc
cgcgaacgcggccttggcccgctcgccgagcagatccttgccgaccgcgcgctggtgccg
gcggagctcgcggaaaaattcgtctccgccgacgtgcccgatgtgaaggcggcgctggaa
ggcgcgcgcgacatcgtcgccgagcagctcacggaaaatgccgaccttctcaagcgcctg
cgcaactatatgaaggacaacgccttcctgcgctcgcgcgtggtcgagggcaagcaggag
gccggcgcgaagttctccgactatttcgaccacaccgaacgctgggcgaccgtgcccggc
catcgcgcgctcgccatgctgcgcggctggaacgaggagttcctgtcggtcgatatcgtc
gtggaccaggacagcaccgagccggtcaagcccgtcgagcgcatcatcgcctccttctat
gccgtcggcaccaggcccggcgacaagtggctggccgacgtcatcggctggacgtggcgt
gtcaagctctccatgtcgctgtcgctcgacctgatgcgcgagatgcgcgaacgctcggag
gaagaagcgatccgcgtcttcgcccgcaatctcaaagatctgctgcttgcagcccccgcc
ggaacgcgcgccacgatgggccttgatccaggcatccgcaccggcgtcaaggtcgccgtg
gtcgacaacaccggcaaggtggtcgagacgacgacggtctatccctttccgccgaagaac
gatgtgcgcggcacgcaggccgaactggccgcgctcattcgcaagcacaaggtggagctg
atctcgatcggcaacggcacgggcagccgcgagacggaaaagctcgtcgccgacctgctc
gcccagcttccggcgcccaagcccaccaaggtcatcgtctcggaggctggtgcctcggtc
tattccgcgtcggaaacggcggccgccgagttcccgaacctcgacgtgtcgctgcgcggc
gcggtgtccattgcgcgccgcctgcaggatccgctcgccgaactcgtcaagatcgagccg
aagtcgatcggcgtcggccagtaccagcacgatgtcgaccagagcaagctgtcgcgttcg
ctcgatgccgtggtcgaggatgccgtgaacgccgtcggtgtcgacctcaacacggcgtct
gcgccgcttctcgcgcgcgtttcgggtctcggcaagtcttccgccgaagccatcgtggcg
catcgtgatgccaacggccccttcgaaagccgcaaggaactgatgaaggtcgcgcgcctc
ggtgcgcgcaccttcgaacagtgcgccggcttcctgcgcatcccgaacggcaaggagccg
ctcgatgcctcgtcggtccatcccgaagcctatggcgtcgccaagaagatcgtcgccgcc
tgcggccgcgacctgcgggcgctgatgggtgacagcgcggcgttgaagcagctcgatccg
aagctgttcgtcgatgagcgcttcggcctgccgaccgtcaaggacatcctcgccgaactg
gaaaaacccggccgtgatccgcgtccggaattcaagaccgcgaccttcgccgatggcatc
gacgacatcaaggacctcaagcccggcatgctgctggaaggcaccgtgacgaacgtcgcc
gctttcggcgcctttgtcgatatcggcgtgcaccaggacggtctggtgcacgtctcccaa
ctcgccgaccgcttcgtcaaggatccgcacgaggtggtgaaggccggcgatgtcgtgaag
gtgcgggtgacggaagtggacgtgccgcgcaagcgcatcggcctcaccatgcgcaaggac
ggggcggccgcagcaccgcgcgacaacgccgcgcgcaacgaccgcaacacccagatgaag
ccgaagttcagccaggccgcgcccaagcagcaggccacgtcgcagggggccttcggcgcc
gcgctcgccgaggcgatgaagaagaagtag
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