Shinella oryzae: K6301_04640
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Entry
K6301_04640 CDS
T08112
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
soj
Shinella oryzae
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
soj03400
]
K6301_04640 (radA)
DNA repair and recombination proteins [BR:
soj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
K6301_04640 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
DUF7125
Zn_ribbon_LapB
AAA_16
ChlI
nSTAND_NTPase5
DnaB_C
RecA_N
AAA_30
AAA
AAA_22
Lon_C
nSTAND3
SLFN-g3_helicase
AAA_5
AAA_24
NACHT
NTPase_1
AAA_14
ATPase_2
GvpD_P-loop
MeaB
AAA_33
CobU
MCM
Elong_Iki1
IstB_IS21
ABC_tran
Hpr_kinase_C
AAA_28
AAA_19
HepII_C
AAA_29
KdpD
NPHP3_N
ArsA_ATPase
NB-ARC
Fer4_NifH
DUF815
DAP3
Motif
Other DBs
NCBI-ProteinID:
UPA25492
LinkDB
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Position
complement(944078..945481)
Genome browser
AA seq
467 aa
AA seq
DB search
MAKGRTQFVCQNCGTVHSRWVGKCEGCGEWNTVVEEDPMGGIGSGPGKVPKKGRPVALTA
LSGEIEEAPRIHTGIAELDRATGGGFVRGSAVLIGGDPGIGKSTLLMQAAAALSRHGHRI
IYVSGEEAVAQVRLRAQRLQAHQTDVLLAAETNVEDILATIGEGKRPDLVIIDSIQTLWS
DTAEAAPGTVTQVRTGVQAMIRFAKQTGAAMVLVGHVTKEGQIAGPRVVEHMVDAVLYFE
GDRGHHYRILRTVKNRFGPTDEIGVFEMSDKGLREVSNPSELFLGERNEKAPGAVVFAGM
EGTRPVLVEVQALVAPTSLGTPRRAVVGWDSARLSMILAVLEAHCGVRLGQHDVYLNVAG
GYRISEPAADLAVASALVSSLAGLALPADCVYFGEVSLSGAIRPVAHTAQRLKEAEKLGF
SQALLPAGSAELPKGTGSRWSEIEGLPDLVARIAGSKSALKREDEDV
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaggccgcactcaattcgtctgccagaactgcggcaccgtgcattcccgctgg
gtgggaaaatgcgagggctgcggcgagtggaacaccgtggtcgaggaagacccgatgggc
ggcatcggctcggggcccggcaaggtgccgaagaagggccgccccgttgcgctgacggcg
ctctccggcgagatcgaggaagcgccgcgcatccataccggcatcgccgaactcgaccgt
gccacgggcggcggcttcgtgcgcggctcggccgtgctgatcggcggcgatcccggcatc
ggcaagtcgacgctgctgatgcaggccgccgccgccctctcccgccatggccaccgcatc
atctatgtctcgggcgaagaggccgtggcgcaggtcaggctgcgtgcgcagcgcctccaa
gcacaccagaccgacgtgctgctcgctgccgagaccaatgtcgaggacatcctggccacc
atcggcgaaggcaagcgcccggacctcgtcatcatcgattcgatccagacgctgtggagc
gacacggcggaggccgcgcccggcacggtgacgcaggtgcgcaccggtgtgcaggccatg
atccgcttcgccaagcagacgggcgcggccatggtgctggtcggccatgtcaccaaggaa
ggacagatcgcgggaccgcgcgtcgtggaacacatggtcgatgccgtgctctatttcgag
ggcgaccgcgggcaccattaccgcatcctgcgcaccgtgaagaaccgcttcggcccgacg
gacgagatcggcgtgttcgaaatgtccgacaagggcctgcgcgaggtttccaatccgtcc
gaactcttcctcggcgagcgcaacgagaaggcgccgggcgcggtggtcttcgcgggcatg
gagggcacgcggcccgtgctggtggaagtgcaggcgctggtggcgcccacatcgctcggc
acgccgcgccgcgccgtcgtcggctgggattcggcgcgcctttcgatgatcctcgccgtg
ctggaggcccattgcggcgtgcggctcggccaacacgacgtttacctcaatgtggcgggc
ggctaccgcatctcggagccggcggcggaccttgcggtggcctcggcgctggtttcctcg
cttgccggtcttgcccttcccgccgattgcgtctatttcggcgaagtcagcctgtcgggc
gccattcgtccggttgcgcacaccgcccagcgcctcaaggaggcggaaaaactggggttt
tcgcaggccctgctgcccgcgggttcagccgaactgcccaagggcaccggcagccgctgg
agcgagatcgaaggcctgccggacctggtggcgcgcatcgccggatcgaagagtgccctc
aagcgggaagacgaggacgtctga
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