Shinella oryzae: K6301_04645
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Entry
K6301_04645 CDS
T08112
Symbol
alr
Name
(GenBank) alanine racemase
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
soj
Shinella oryzae
Pathway
soj00470
D-Amino acid metabolism
soj01100
Metabolic pathways
soj01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
K6301_04645 (alr)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
K6301_04645 (alr)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
soj01011
]
K6301_04645 (alr)
Enzymes [BR:
soj01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
K6301_04645 (alr)
Peptidoglycan biosynthesis and degradation proteins [BR:
soj01011
]
Precursor biosynthesis
Racemase
K6301_04645 (alr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Motif
Other DBs
NCBI-ProteinID:
UPA25493
LinkDB
All DBs
Position
complement(945584..946753)
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AA seq
389 aa
AA seq
DB search
MSKHPASGRPTLPVAGEDHARLTIDLSALADNWRAMARRSGAARTAAVLKADAYGIGLEP
AAKTFHQAGARDFFVATPAEGAAVRTALPDARIYVLSGMWAGAERLFFEFDLVPVIVSEE
QLVVFMSAIADGGDIPCVLHVDTGMSRLGLRVEDALALAEDIARPASFSPIMLLSHLACA
DEPSHALNRQQLQRFRSVVSAFGDIDATLANSAGIFLGEDYHFTLTRPGIALYGGAAVNG
VPNPMKPVVTAEARILQVRDVKAGESVGYGAAVVCARDTRVAIAAIGYADGYMRSLSSAG
IPLRRTGLAGPSGMLHGRTVPVIGRVTMDLTHFDVTDMPAGSVRPGDFIELFGRTMPIED
VARAAGTVDYELLTSLGNRYERRYEAVKK
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacatccagcttccggccgccccacgcttcctgtcgcaggcgaggatcatgcc
cgcctgacgatcgacctttccgcgctggccgacaactggcgcgccatggcccgccgctcg
ggcgccgcgcgcaccgccgccgtgctgaaggccgacgcctacggcatcgggctggagcca
gccgccaaaacgttccaccaggccggcgcgcgcgatttcttcgtcgccacaccggccgaa
ggggcggcggtccgcactgcgctgcccgatgcgcgcatctatgtgctttcgggcatgtgg
gcgggcgccgagcggctgttcttcgaattcgacctcgtgccggtcatcgtctccgaggag
cagctggtcgtgttcatgtcggcgatcgccgacggcggggacattccctgcgtgctgcat
gtcgataccggcatgagccgtctgggactgagggtggaggatgcgctggcgctggccgag
gacatcgcgcgtcccgcgagcttctcgccgatcatgctcttgagccacctcgcctgcgcc
gacgagccgtcccacgcgctcaaccgacagcagctccagcgcttccgcagcgtcgtttcc
gccttcggcgatatcgacgcgacgcttgccaattccgccggcatcttcctcggcgaggac
tatcacttcaccctcacccgccccggcatcgcgctatatggcggggccgcggtcaatggc
gtgccgaaccctatgaaaccggtcgtcacggcggaggcgcgcattctccaggtgcgcgac
gtgaaggccggcgaaagcgtcggctacggcgccgccgtggtctgcgcccgcgatacgcgc
gtcgccattgccgccatcggctatgcggacggctatatgcgcagcctttccagcgccggc
ataccgctgcgccggaccggccttgccggcccgagcggcatgctgcatggccgcaccgtg
ccggtcatcggccgcgtgaccatggacctcacgcatttcgacgtgacggacatgcccgcg
ggaagcgtgcggccgggcgacttcatcgaactcttcggcaggaccatgccgatcgaggat
gtggcgcgcgccgccggcaccgtcgactacgaacttctcaccagcctgggcaaccgctac
gaacggcgttacgaggccgtaaagaagtag
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