Shinella oryzae: K6301_04800
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Entry
K6301_04800 CDS
T08112
Name
(GenBank) TRAP transporter large permease subunit
KO
K11690
TRAP-type transport system large permease protein
Organism
soj
Shinella oryzae
Pathway
soj02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
K6301_04800
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soj02000
]
K6301_04800
Transporters [BR:
soj02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
K6301_04800
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctM
ACT_7
Motif
Other DBs
NCBI-ProteinID:
UPA25522
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Position
977328..979124
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AA seq
598 aa
AA seq
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MIEFIADNLAPIMFVSLIVFLLLGYPVAFSLAANGLLFFVIGVELAPLSDSINLSWPLLN
AMPERLWGVMSNDTLLAIPFFTFMGIVLERSGMAEDLLDTIGQLFGPIRGGLAYAVIFVG
ALLAATTGVVAASVIAMGLISLPIMLRYGYDRSIASGVIAASGTLAQIIPPSLVLIVLAD
QLGRSVGDMYAGALIPGLVLTGLYMLYILIMTFLKRDSMPALPLEARSLGPGVTSLIVAL
AVAAGIAYAAHVYLYPTHGENADILGGTVGVIFIYIVALADKGLNINMMSRLAQQVIIVL
IPPLALIFLVLGTIFLGIATPTEGGAMGAVGALIMAAAKGRLNMDVMRSALAATTRLSSF
VLFILIGARVFSLTFYGVNGHLWVEHLLVSMPGGETGFLIAVNVLVFFLAFFLDFFELAF
IIVPLLAPAADRLGIDLIWFGVLLGINMQTSFMHPPFGFALFYLRSVAAKIPYLDKVTGK
RMEPVTTGQIYWGAVPFVGIQILMVALTIMFPGMVMHYKGEGSGVDPATIKIEVPGFGGS
GGGLGLPDNGGGLGLPGGLQLPAGNPLDGGGAQQPAEGGQQGTEQKPATDLSSPPSFN
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgatcgagttcatcgctgacaacctcgcaccgatcatgttcgtgtcgctgatcgtgttc
ctcctgctcggctatcccgtggccttctcgctggcggcaaacggtctgctcttcttcgtc
atcggcgtggaactcgcgccgctctccgattcgatcaacctctcctggccgctgctcaac
gcgatgccggaacggctatggggggtgatgtcgaacgacacattgctcgccatccccttc
ttcaccttcatgggcatcgtgctcgaacggtccggcatggccgaggacctgctcgacacg
atcggccagctcttcgggccgattcgcggcggcctggcctatgcggtcatcttcgtcggc
gcgctgcttgcggccaccaccggcgtcgtcgccgcctcggtcatcgccatgggcctcatc
tcgctccccatcatgctgcgctacggctatgaccggtcgatcgcctcgggcgtcattgcc
gcttcgggcacgctcgcgcagatcatcccgccgtcgctcgtgctgatcgtgctcgccgac
cagctcggccgctccgtcggcgacatgtatgccggcgcgctgattcccggcctggtcctg
accgggctctacatgctctacatcctgatcatgacgttcctgaagcgggattccatgccg
gccctgccgctggaggcgcgctcgctcgggccgggcgtgacatcgctgatcgtcgcgctc
gccgtggcggcgggcatcgcctatgccgcgcacgtctatctatacccgacacatggcgag
aatgccgatatcctcggcggcacggtcggcgtcatcttcatctatatcgtggcgctggcc
gacaagggcctgaacatcaacatgatgtcgcggctcgcccagcaggtcatcatcgtgctg
atcccgccgctggcgctgatcttcctggtgctcggcacgatcttcctcggcatcgccacg
cccacggaaggcggcgcgatgggtgcggtcggcgcgctgatcatggcggcggcaaagggc
cggctcaatatggatgtcatgcgctcggcgctggccgccaccacgcgcctctcgtccttc
gtgctgttcatcctcatcggtgcgcgcgtcttctcgctcaccttctacggcgtgaacggg
cacctgtgggtcgaacacctgctggtctcgatgccgggcggcgagacgggcttcctgatc
gcggtgaacgttctggtcttcttcctggcgttcttcctcgatttcttcgagctcgccttc
atcatcgtgccgctgctcgcacccgcagcagacaggctcggtatcgatctcatctggttc
ggcgtgctgctcggcatcaacatgcagacgagcttcatgcatccgcccttcggcttcgcg
ctgttctacctgcgctcggtcgccgccaagataccctatctcgacaaggtcaccggcaag
cggatggaacccgtcaccaccggccagatctactggggcgcggtgcccttcgtcggcatc
cagatcctgatggtggcgctgaccatcatgttcccgggcatggtcatgcactacaagggc
gagggcagcggcgtcgatcccgccacgatcaagatcgaggtgcccggcttcggcggcagc
ggcggcggtctcggcctgccggacaatggcggcggcctcggattgcccggcggcctgcaa
ctgcccgccggcaacccgctggacggcggcggtgcgcagcagccggccgaaggtggccag
caaggcaccgaacagaaacccgccaccgacctctcaagcccgccgtcgttcaactga
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