Shinella oryzae: K6301_04815
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Entry
K6301_04815 CDS
T08112
Name
(GenBank) ABC-F family ATP-binding cassette domain-containing protein
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
soj
Shinella oryzae
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
soj03012
]
K6301_04815
Translation factors [BR:
soj03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
K6301_04815
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
ABC_tran_CTD
AAA_29
AAA_30
AAA_23
MMR_HSR1
SbcC_Walker_B
AAA_5
Motif
Other DBs
NCBI-ProteinID:
UPA25525
LinkDB
All DBs
Position
complement(981106..982992)
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AA seq
628 aa
AA seq
DB search
MITISGLTARIAGRLLIDNASLSLPSGTKAGLVGRNGTGKSTLFRIITGALSPEAGTITL
PKNARIGQVAQEAPGTDDALIEIVLAADRERAALLKEAETASDPHRIAEIQTRLTDIGAH
SAEARAASILAGLGFDHEAQQRPAKSFSGGWRMRVALAAVLFSEPDLLLLDEPTNYLDLE
GTLWLEDYVRRYPHSVIIISHDRDLLNTAVNAIVHLDQQKLTFYRGSYDQFERQKAENDE
LQMKAKAKNDAARKHLQSFIDRFRAKATKARQAQSRIKALERMGTVAAVIETHVQPITFP
EPEKQPASPIIAIEGGAVGYAPGKPILRQINLRIDNDDRIALLGSNGNGKSTFAKFISGR
LEAESGVVKRAPGLKIGFFAQHQLDDLIPDQSPVEHVRRLMPEAPEAKVRARVAQMGLAT
EKMSTPAKDLSGGEKARLLMGLAAFDAPNLLILDEPTNHLDIDSRRALIEALNDYEGAVI
LISHDRHLIEATVDRLWLVNNGTVKAFEGDMEDYRGLIVQSGKRDDKDKPAAGGDTANKA
DQRKANADRRAQFAPLKKKINEIESLTAKLNKQIQLLDAELADPALYEKSPAKAAEKAKL
RAMAADRLNEAEEQWLELSAEYEEAMAG
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgatcacgatttccggcctcaccgcccgcatcgccgggcgtctcctcatcgacaacgcg
tcgctctcgctgccttccggcacgaaggcgggtctcgtcgggcgcaacggcaccggcaag
tccacgctgtttcgcatcatcaccggcgcgctctcgccggaggccgggacgatcacgctg
ccgaagaacgcgcgcatcggccaggtggcgcaggaagccccgggcacggacgatgcgctg
atcgagatcgtgctggccgccgacagggaacgcgccgcccttctcaaggaggcggagacg
gccagcgatccgcaccgcattgcggaaatccagacgcggctcaccgatatcggcgcgcat
tcggccgaggcgcgcgcggccagcattcttgccggtctcggcttcgaccacgaggcgcag
cagcggcccgcgaaaagcttttccggcggctggcgcatgcgcgtggcgctggcggccgtg
ctgttttccgagccggacctgcttttgctcgacgagccgacgaactatctcgacctcgaa
ggcacgctgtggctggaagactatgtgcggcgctatccgcacagcgtgatcatcatcagc
cacgaccgcgacctgctcaacaccgccgtcaacgccatcgtgcatctcgaccagcagaag
ctgaccttctaccgcggctcctacgaccagttcgagcgccagaaggccgagaacgacgaa
ttgcagatgaaggcgaaggccaagaacgacgccgcgcgcaagcatcttcaaagcttcatc
gatcgcttccgcgcgaaggcgacgaaggcgcggcaggcgcaaagccgcatcaaggcgctg
gagcgcatgggcacggtggccgccgtcatcgagacccatgtgcagccgatcaccttcccc
gagccggaaaagcagccggcctcgccgatcatcgccatcgagggcggcgcggtgggctat
gcgccgggcaagccgatcctcaggcagatcaacctgcgcatcgacaatgacgaccgcatc
gcgctgctgggctcgaacggcaacggcaagtcgaccttcgccaagttcatctcgggccgg
ctggaggcagaatcgggtgtggtgaagcgggcgccggggctgaagatcggcttcttcgcg
cagcaccagctggacgatctcattcccgaccagtcgcccgtcgagcatgtgcgccggctg
atgccggaggcgccggaagccaaggtgcgcgcccgcgtcgcccagatggggcttgcgacg
gagaagatgtccacgcccgccaaggacctgtcgggtggcgaaaaggcgcgcctcctcatg
ggccttgccgccttcgacgcgccgaacctgctcattctcgacgagccgaccaaccatctc
gacatcgacagccgccgcgcactgatcgaggcgctgaacgattacgagggcgccgtcatc
ctcatctcgcacgaccggcacctgatcgaggccaccgtcgaccggctgtggctggtcaac
aacggcaccgtaaaggccttcgaaggcgacatggaggattatcgcggcctcatcgtgcaa
tccggcaagcgggacgacaaggacaagccggcggcgggcggcgacaccgccaacaaggcc
gaccagcgcaaggccaatgccgaccggcgcgcgcaatttgcgccgctcaagaaaaagatc
aacgaaatcgaatccctgacggcgaaactgaacaagcagattcaactgcttgatgcggaa
cttgcggaccccgcgctctacgagaagagcccggccaaggccgccgagaaggccaagctg
cgcgccatggccgccgacaggctcaacgaggccgaggagcaatggctggagctgtcggcc
gagtacgaagaggcgatggccggctga
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