Shinella oryzae: K6301_05295
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Entry
K6301_05295 CDS
T08112
Symbol
secD
Name
(GenBank) protein translocase subunit SecD
KO
K12257
SecD/SecF fusion protein
Organism
soj
Shinella oryzae
Pathway
soj02024
Quorum sensing
soj03060
Protein export
soj03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
K6301_05295 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
K6301_05295 (secD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
K6301_05295 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
soj02044
]
K6301_05295 (secD)
Secretion system [BR:
soj02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
K6301_05295 (secD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
MMPL
Motif
Other DBs
NCBI-ProteinID:
UPA25614
LinkDB
All DBs
Position
1075806..1078343
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AA seq
845 aa
AA seq
DB search
MKTSKWALIVSTLLILFGVLAAVPNVLTPEQQSKYGRYLPANPVTLGLDLKGGSHLVLEV
DSAALRKARMDALLNDTRAILRTAGERASAARLNGTTLTVTLPDQAALDKVLPEVRKLAT
PTSTLGFGTGSSDIDVATSGQVINVTLTEAGINERMSAAVEQSLEIIRRRVDQVGVAEPL
IQRVGGDRILVQLPGLQDPTRLRQLLGSTAQMSFHMVDQTVDPNGVAPRGVMILPGANDN
NKYAVEERVAISGDRLADAKAGFDQRTSEPIVSFSFDSTGARQFAEITQANVGKPFAIVL
DGKVLTAPVIREPIIGGQGQISGNFNPQEATVLSALLRSGALPAPLTIIEERTVGPNLGS
DSIRMGLYTGLAGLAAVVVLMQVLYGSWGLIANLGLVLHTILTIGLLGLLGSTLTLPGIA
GIILGIGMAVDANILINARIREETAGGAGAMKALDVGFNKAYATIVDGNMTTMVGMVLLF
MFGSGPVRGFAITMIIGLAISMFTSITFVRFLMREAVIWRKMKKIEIHSIFGKTWSMPTF
SFMRGRYIAIAVSAFISTSSIVLFFTPGLNYGIDFVGGIQVEATSKTPIDLGPLRSKMEG
LNLGEVALQEFGQGTSVLVRVQRQPGGEEVQTAALQKIRDGVAEVIPDASFERTEVVGPT
VSTELARSGFLAVGLGMVAILIYIWWRFEWHFAVGAIATLILDITKMIGFFALLQIDFNL
TAIAAVLTLIGYSVNDKVVVYDRMRENMRKYKTMPFSDLIDLSINQVVMRCIFTSVAVAA
SLLPMAIWGGDTVKPFAWPMLFGVIVATTSSIYIGGPILLFLNRYWKDRSATRTAGTPGT
PAAEA
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacgtccaaatgggcactgatcgtctcgacccttctcatcctcttcggggtgctt
gcggccgtgccgaacgtgctgacgcctgaacagcagtcgaaatacgggcgctacctgccc
gccaaccccgtcaccctcgggctcgacctgaagggcggctcgcacctcgttttggaggtg
gattcggcagcgctgcgcaaggcgcgcatggatgcgctgctcaacgatacgcgcgccatc
ctgcgcacggccggcgaacgcgcctccgccgcgcgcctgaacggcacgacgctgacggtg
acgctgcccgaccaggccgcgctcgacaaggtcctgccggaggtgcgcaagctcgccacc
ccgacatcgaccctcggcttcggcaccggttcctccgatatcgatgtcgccaccagcggc
caggtgatcaacgtcaccctgacggaagccggtatcaacgagcgcatgtcggctgcggtc
gagcagagcctcgagatcatccgccgccgcgtggaccaggtcggcgttgccgaaccgctc
atccagcgtgtcggcggcgaccgcattctcgtccagctgcccggtctccaggacccgacg
cgtcttcgccagctgctcggctcgaccgcgcagatgagcttccacatggtcgaccagacc
gtggatccgaacggtgtcgctccccgcggcgtgatgatcctgcccggcgccaacgacaac
aacaaatacgccgtcgaagagcgggtcgccatttccggcgaccgtctggccgatgccaag
gccggcttcgaccagcgcacgagcgagccgatcgtttcgttcagcttcgattccaccggt
gcacgccagttcgcggaaatcacgcaggccaatgtcggcaagcctttcgccatcgtcctc
gacggcaaggtgctgaccgcgcccgtcatccgcgagccgatcatcggcggccagggccag
atatccggtaacttcaacccgcaggaagcgaccgtgctttccgcgctgctgcgttcgggc
gcgctgcccgcgccgctcaccatcatcgaagaacgcaccgtcggcccgaacctcggctcg
gactcgatccgcatgggcctctataccggtctcgccggccttgccgccgtcgtcgtgctc
atgcaggtgctctacggttcctggggcctcatcgccaatctcggtctcgtgctgcacacg
atcctgacgatcggcctgctcggccttctcggttcgacgctcacgctgcccggcatcgcc
ggtatcattctcggcatcggcatggccgttgacgccaacatcctcatcaacgcgcgtatc
cgagaggaaacggcgggcggggcgggtgccatgaaggcgctcgacgtcggcttcaacaag
gcctatgcgaccatcgtcgacggcaacatgacgaccatggtcggcatggtcctgctcttc
atgttcggctccggccccgtgcgcggcttcgccatcaccatgatcatcggccttgcgatc
tcgatgttcacctcgatcaccttcgtgcgcttcctgatgcgcgaggcggtcatctggcgc
aagatgaagaagatcgagatccattcgatcttcggtaagacctggagcatgccgaccttc
tccttcatgcgcggccgctatatcgcgatcgccgtgtcggccttcatctcgacgagctcg
atcgtcctgttcttcacgccgggcctgaactacggcatcgacttcgtcggcggtattcag
gtggaggcgacgtccaagacgccgatcgatctggggccgctgcgctcgaagatggaaggc
ctcaacctcggcgaagtggcgttgcaggaattcggccagggcacgtcggtcctcgtgcgc
gtccagcgtcagccgggcggcgaggaagtgcagaccgcggccttgcagaagatccgcgac
ggtgtggcggaagtcattccggatgccagcttcgagcggacggaagtggtgggcccgacg
gtcagtaccgagcttgcccgctccggcttcctggccgtgggtctcggcatggtcgccatc
ctgatctacatctggtggcgcttcgagtggcactttgccgtgggcgccatcgcgacgctg
atcctcgatatcaccaagatgatcggtttcttcgcgctgctgcagatcgacttcaacctg
acggccatcgccgccgtgctgacgctgatcggctactcggtgaacgacaaggtggtcgtg
tacgaccgcatgcgagagaacatgcgaaaatacaagacgatgcccttctcggacctgatc
gatctatcgatcaaccaggtggtcatgcgatgcatcttcacctcggttgccgttgcggcc
tcgctgctgccgatggcgatctggggcggcgacacggtcaagcccttcgcctggccgatg
ctgttcggcgtcatcgtcgcgacgacctcgtcgatctatatcggcggtccgatcctgctg
ttcctcaaccgctactggaaggatcgcagcgcaacgaggacggccggcacgcccggcacg
cccgctgcggaagcctaa
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