Shinella oryzae: K6301_06635
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Entry
K6301_06635 CDS
T08112
Name
(GenBank) extracellular solute-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
soj
Shinella oryzae
Pathway
soj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
K6301_06635
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soj02000
]
K6301_06635
Transporters [BR:
soj02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
K6301_06635
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
UPA26239
LinkDB
All DBs
Position
complement(1330362..1332089)
Genome browser
AA seq
575 aa
AA seq
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MHGEPALPADYTHFPYINPAVKKGGRIAYGVVGTFDNLNPFILKSMRTTARGMWDPEFGN
LVYEPLMQRSRDEAFTMYGLLAETVVMDDDRTFIQFNLNPRARWADGEKVTAEDVIFSFE
LLRDKGRTPFNRRLDGVAKMEKVGENSVRFTFNDKADRETPLLIAGYSPILPKHAIDVET
FDRTSLSFPLGSGPYKVKAIRPGERIVYERNPDYWARDLPSKVGFDNYDEISVEYFLQDN
SLFEAFKKGEIDLYQEGSPTKWVRNYDFPAIASGDIVKDAVSPKTPSGMFGFVFNTRRPV
FQNRELRKALTLVFDFEWVNRSLFENAYKRTQSFWQNSELSSMGVPADARERAVAGAALE
RIEPDILAGTHRLPTTDGSGRDRKVLRLAMDSFIKAGYAIKGGQMVDANGKPLAFEIMTQ
NADQEKLALAYQRFLAALGVKVGIRTVDDSQYQSRSQTFDYDVIIKSFPSSLSPGRDQIS
YWSSTMSDFPGSSNFAGVADLDVDRFIDAMLNARSAEDFRSAVRLHDRMLLSGYYVVPLY
HLGEQWVAHSKRIQRPEKTPLYGFQFPAWWDARAQ
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgcatggcgaacctgccctgccggcggattacacgcactttccttacatcaatcctgcc
gtcaagaagggcgggcgcattgcctatggcgtcgtcgggaccttcgacaatctcaatcct
ttcatcctgaaaagcatgcgcacgaccgcgcgcggcatgtgggatccggaattcggcaac
ctcgtctatgagccgctcatgcagcgctcccgcgacgaggctttcaccatgtatggcctg
cttgccgaaaccgtcgtgatggacgacgaccggaccttcatccagttcaacctcaacccc
agggcacgctgggcggacggcgagaaggtgaccgccgaagacgtcatcttcagcttcgaa
ctgctgcgcgacaagggccgcacacccttcaaccgcaggctcgacggtgtggcgaaaatg
gagaaggtcggcgaaaacagcgtgcgcttcaccttcaacgacaaggccgaccgcgagacg
ccgctgctgatcgccggctattcgccgatcctgccgaaacatgccatcgacgtcgagacc
ttcgaccgcacgtcgctgtcgttcccgctcggctccgggccctataaagtgaaggcgatc
cggcctggcgaaaggatcgtctacgagcgcaatccggattattgggcccgggatcttccc
tcgaaggtcggcttcgacaattacgacgagatttccgtcgagtacttcctgcaggacaat
tcgctattcgaggccttcaagaagggcgaaatcgacctctaccaggagggaagcccgacg
aaatgggtgcgaaactacgattttcccgccatcgcctccggtgacatcgtaaaagatgcg
gtcagccccaaaacgccatcgggcatgttcggcttcgtcttcaacacccgccggcccgtc
ttccagaacagggaactgcgcaaggccctgacgctggtgttcgatttcgaatgggtcaac
cgcagccttttcgagaatgcctacaagcgcacgcagagcttctggcagaactccgagctc
agctccatgggcgtgccggcggatgcccgtgaacgggccgtggcgggcgcggcgctcgag
cggatcgaaccggatatcctcgccggcacgcatcgcctgcccaccacggatggttcgggc
cgggaccgcaaggtgctgcgcctggcgatggattcgttcatcaaggccggctacgccatc
aagggcggccagatggtcgacgcgaacggcaagccgctcgccttcgaaatcatgacgcag
aacgccgatcaggaaaagctcgcgctcgcctatcagcgttttcttgcggcactcggggtg
aaggtcggcatccggacggtggatgattcgcagtaccagagccgcagccagaccttcgac
tacgacgtgatcatcaagtccttcccctcctcgctttcgcccggacgcgaccagatcagc
tactggagctcgacgatgagtgactttccgggaagctcgaactttgccggcgttgccgat
ctggatgtcgaccgtttcatcgatgcgatgctgaacgcgcgctccgccgaggatttccgt
tcggccgtgcgcctgcacgacaggatgctgctttccggctactatgtcgtgccgctctac
catctcggcgagcagtgggtggcgcattccaagcgtatccagcgcccggaaaagaccccg
ctctacggcttccagttccccgcatggtgggacgctcgcgcgcaatga
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