Shinella oryzae: K6301_06795
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Entry
K6301_06795 CDS
T08112
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
soj
Shinella oryzae
Pathway
soj03030
DNA replication
soj03430
Mismatch repair
soj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K6301_06795
03430 Mismatch repair
K6301_06795
03440 Homologous recombination
K6301_06795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
soj03032
]
K6301_06795
03400 DNA repair and recombination proteins [BR:
soj03400
]
K6301_06795
Enzymes [BR:
soj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K6301_06795
DNA replication proteins [BR:
soj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K6301_06795
DNA repair and recombination proteins [BR:
soj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K6301_06795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
UPA25885
LinkDB
All DBs
Position
1356164..1357195
Genome browser
AA seq
343 aa
AA seq
DB search
MSDERPGILDGAVHPAEQTKLFGHVEAEDFLARTYRSGKGHHAILMEGPEGIGKATFAFR
FANHVLHHPDPSAAPESLAAPSLASPITRQLAAGSSHNLLHLTRPVDEKSGKVKSAITVD
EVRKAGKFLAQTSGTGNWRIVIIDPADDLNRNAANAILKILEEPPKRALFLVLTHAPGKL
LPTIRSRCMPLALAPLSDADLVSALDSLGVAPSGERAGALIEAAHGSVSEALKLVNYGGF
DIVEAFRAIVDGAAEPPRRDVHKLADVLSAKDSDTVFSFFCQHAADFVTDSARAAALAGD
IARADRLAQLSSQLGERIAIAQGYNLDRKQTIITVLDDIRAAL
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacgagcgcccgggcattctggatggcgcggtacatcccgccgagcagacgaag
cttttcggccatgtcgaggcggaggatttccttgcgcgcacctatcgttcgggcaagggg
catcacgccatcctgatggaggggccggaggggatcggcaaggcgacgttcgccttccgc
ttcgccaaccacgtgctgcatcatcccgatccgtccgctgcaccggagagcctcgccgcg
ccctcgctcgcctcgccgatcacccgtcagctggcggccggctcctcccataatctgctg
caccttacccgcccggtggacgagaagagcggcaaggtgaaatccgcgattaccgtggac
gaggtgcgcaaggccggaaaattcctggcgcagacctccggtacgggcaactggcgcatc
gtcatcatcgatcccgcggatgatctcaaccgcaacgccgccaacgccatcctgaagatc
ctggaggagccgccgaagcgggcgctcttccttgtcctgacccatgcgccgggcaagctg
ctgccgaccatccgctcgcgctgcatgccgttggcgcttgcgccattgtctgatgcagat
ctcgtctcggccctggacagcctcggcgtcgcaccatcaggcgaacgggcaggggcgctg
atcgaagccgcgcatggcagcgtctcggaggcgctgaaattggtgaactacggcggtttc
gacatcgtggaagcattccgcgccatcgtcgacggagcggccgaaccaccacgccgcgac
gtgcacaagctcgccgatgtgctctctgcgaaagacagcgacaccgtcttctccttcttc
tgccagcacgcggcggatttcgtgacggacagcgcccgcgccgcagccctcgccggcgac
atcgcccgcgccgaccgccttgcgcaactctcgtcgcaactcggcgagcgcatcgccatc
gcgcagggctacaacctcgatcgcaagcagacgatcatcaccgtgctcgacgacatccgg
gcggcgctatag
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