Shinella oryzae: K6301_06870
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Entry
K6301_06870 CDS
T08112
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
soj
Shinella oryzae
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
soj03032
]
K6301_06870 (gyrA)
03400 DNA repair and recombination proteins [BR:
soj03400
]
K6301_06870 (gyrA)
Enzymes [BR:
soj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
K6301_06870 (gyrA)
DNA replication proteins [BR:
soj03032
]
Prokaryotic type
DNA Topoisomerases
K6301_06870 (gyrA)
DNA repair and recombination proteins [BR:
soj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
K6301_06870 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
CAP18_C
Motif
Other DBs
NCBI-ProteinID:
UPA25899
LinkDB
All DBs
Position
complement(1368292..1371081)
Genome browser
AA seq
929 aa
AA seq
DB search
MTEQTTPGGKNPPGIEPISIIEEMQRSYLDYAMSVIVSRALPDVRDGLKPVHRRILYSMS
EMGVDWNKKYVKSARVTGDVMGKYHPHGDSAIYDALARMAQDWSLRLPLIDGQGNFGSID
GDPPAAQRYTECRLEKAAHSLLDDLDKETVNFRDNYDGTMSEPVVVPAKFPNLLVNGAGG
IAVGMATNIPPHNLSEVINGCIALIDNPAIDLIELMQHIPGPDFPTGALILGRSGIRQAY
ETGRGSVVMRGRATIEPMRGDREQIIITEVPFQVNKATMIEKMAELVRDKRIEGISDLRD
ESDRDGYRVVIELKRDANADVILNQLYRYTPLQTSFGCNMVALNGGKPEQMTLLDMLRAF
VAFREEVVSRRTKYLLRKARDRAHVLVGLAIAVANIDEVIALIRSAPDPQTAREQLMERR
WPAKDVEALIRLIDDPRHRINEDLTYNLSEEQARAILELRLARLTALGRDEIDEELNKIG
EEIKDYLDILSSRLRIMTIVKDELSAIRDEFGTPRRTEITEGGPDMDDEDLIAREDMVVT
VSHAGYVKRVPLATYRAQRRGGKGRSGMAMKDEDFATRLFVANTHTPVLFFSSRGIVYKE
KVWRLPIGTPQSKGKALINMLPIEPGERITTIMPLPEDETTWENLDVMFSTTRGTVRRNK
LSDFVQVNRNGKIAMKLEEDGDEILNVETCTDRDDVLLTTALGQCIRFPVDDVRVFAGRN
SVGVRGINLGAGDRIISMTIVSHVDAEPWERAAYLKRSAAERRASGADEEEIALVGEDVG
EVGDLSEERYQELKALEQFVLTVSQRGFGKRSSSYDFRTSGRGGKGIRATDTSKTSEIGE
LVAAFPVEETDQLMLVSDGGQLIRVPVNGIRIASRATKGVTIFSTAKDEKVVSVERISEP
EGDDEMEIEGEAVVVDGEIDAGPEGEGEA
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
ttgacagaacaaacgacacccggcggaaagaaccctcctggcattgagccgatttccatc
atcgaggaaatgcagcggtcctatctcgattacgccatgagcgtgatcgtgtcccgtgcg
ctgccggacgtgcgcgacggtctcaagcccgtgcaccggcgcatcctctactcgatgagc
gagatgggcgtcgactggaacaagaaatacgtgaagtcggcccgcgtcaccggtgacgtg
atgggtaaataccatccgcacggcgactcggcgatctatgacgccctggcgcgcatggcg
caggactggtcgctccgcctgccgctgatcgacggccaggggaacttcggctccatcgac
ggcgacccgccggcagcccagcgttacacggaatgccgcctggaaaaggccgcccattcg
ctgctcgacgatctcgacaaggagaccgtcaacttccgcgacaactacgacggcacgatg
agcgagccggtcgtggtgcccgcgaagttcccaaacctgctggtcaacggcgcgggtggc
attgccgtcggcatggcgacgaacattccgccgcataacctttcggaagtgatcaacggc
tgcatcgcgctgatcgacaatcccgcgatcgatctcatcgagctgatgcagcatattccg
ggcccggattttccgacgggcgcgctgatcctcggccgttccggcatccgacaggcctat
gagaccggccgcggttccgtcgtcatgcggggccgcgccaccatcgaaccgatgcgcggc
gaccgcgagcagatcatcatcaccgaggttcccttccaggtgaacaaggcgacgatgatc
gagaagatggccgagctggtgcgcgacaagcgcatcgaaggcatttccgatctccgcgac
gagtccgaccgcgatggctaccgcgtcgtcatcgagctgaagcgcgacgccaatgccgac
gtcattctgaaccagctttatcgctacacgccgctgcagacctccttcggctgcaacatg
gtggcgctcaatggcggcaagccggagcagatgacgctgctggacatgctgcgcgccttc
gtcgccttccgcgaggaagtcgtcagccgccgcacgaagtacctgctgcgcaaggcgcgc
gaccgcgcccatgtcttggtgggcctcgccatcgcggtcgccaatatcgacgaggtcatc
gcccttatccgcagcgcgcccgatccgcagacggcgcgcgagcagctgatggagcgccgc
tggccggccaaggacgtcgaggcgctgatccgcctcatcgacgacccgcgccatcgcatc
aacgaggacctgacctacaatctctcggaggaacaggcccgcgcgatcctcgaactgcgt
cttgcccgcctgacggcgctcggccgcgacgaaatcgacgaagagctgaacaagatcggc
gaggagatcaaggattacctcgatatcctgtcgtcgcgcctgcgcatcatgacgatcgtc
aaggacgagcttagtgccatcagggacgagttcggcacgccgcgccgcacggagatcacc
gaaggtggtcccgacatggacgacgaggacctgatcgcccgcgaggacatggtggtcacc
gtgtcgcatgccggctacgtcaagcgcgtgccgctggcgacctatcgcgcccagcgccgt
ggtggcaagggccgctccggcatggccatgaaggacgaggatttcgcaacccgcctgttc
gtcgccaatacgcacacgccggtgctgttcttctcctcgcgtggcatcgtctacaaggag
aaggtctggcgcctgccgatcggcacgccgcagtccaagggcaaggcgctgatcaacatg
ctgccgatcgagcccggcgaacgcatcaccaccatcatgccgctgccggaggacgagacg
acgtgggaaaacctcgacgtcatgttctcgacgacacgcggaacggtgcgccgcaacaag
ctttccgacttcgtccaggtcaaccgcaacggcaagatcgcgatgaagctcgaggaggac
ggcgacgagatcctcaatgtcgagacctgcacggatcgtgacgacgtgttactgacgacg
gcgctcggccagtgcatccgcttcccggtcgatgatgtgcgtgtcttcgccggccgcaat
tcggtcggtgtgcgcggcatcaatctgggcgccggcgatcgcatcatctcgatgacgatc
gtcagccatgtcgatgccgagccgtgggaacgagccgcttatctcaagcggtccgccgcc
gagcggcgcgcaagcggcgctgacgaagaggaaatcgcactggtcggcgaggatgtcggc
gaagtcggcgacctctcggaagagcgctaccaagagctcaaggcgctcgagcagttcgtg
ctgacggtgtcgcagcgcggcttcggcaagcggtcgtcgtcctacgacttccgcacctcc
ggccgcggcggcaagggtatccgcgcgacggacacctccaagacaagcgaaatcggcgaa
ctcgtcgccgccttcccggtcgaggaaacggaccagctgatgctcgtctccgatggtggc
cagctgatccgcgtgccggtcaacggtatccgtatcgccagccgcgccacgaagggcgtc
acgatcttctccaccgcgaaggacgagaaggttgtctccgtggaacgcatcagcgagcct
gaaggcgatgatgagatggagatcgagggcgaggccgtcgtcgtggatggcgagatcgac
gccggtcctgaaggcgagggcgaggcataa
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