Shinella oryzae: K6301_07585
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Entry
K6301_07585 CDS
T08112
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
soj
Shinella oryzae
Pathway
soj00260
Glycine, serine and threonine metabolism
soj00630
Glyoxylate and dicarboxylate metabolism
soj00670
One carbon pool by folate
soj00785
Lipoic acid metabolism
soj01100
Metabolic pathways
soj01110
Biosynthesis of secondary metabolites
soj01200
Carbon metabolism
Module
soj_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
K6301_07585 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
K6301_07585 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
K6301_07585 (gcvP)
00670 One carbon pool by folate
K6301_07585 (gcvP)
Enzymes [BR:
soj01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
K6301_07585 (gcvP)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Aminotran_1_2
SepSecS
Motif
Other DBs
NCBI-ProteinID:
UPA26029
LinkDB
All DBs
Position
1517789..1520650
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AA seq
953 aa
AA seq
DB search
MNLPKDFAFTDYQPYDFANRRHIGPSPKEMEAMLKVIGYDSLDALIDDTVPKSIRQTKAL
EWGAAMTEREALDKLRETANRNRKFVSLIGQGYYGTITPPVIQRNILENPAWYTAYTPYQ
PEISQGRLEALLNYQTMVCDLTGLDVANASLLDEATAAAEAMAMAQRVAKSKATAFFVDE
NCHPQTIALLKTRAEPLGWQIVVGDPFTDLDPVDVFGAIFQYPGTYGHVRDFTGLNARLH
QTGAIAVMAADPLALALLKSPGDMDADIAIGCTQRFGVPVGYGGPHAAYMAVKDAYKRSM
PGRLVGVSIDARGNRAYRLSLQTREQHIRREKATSNICTAQVLLAVMASMYAVFHGPQGL
KAIAQSVHQKTVRLAKGLEKLGFTVEPDMFFDTITVHVGKLQGIILKTAVAEEVNLRKIG
NDRIGISLDERSRPVTLEAVWRAFGGDFEVSEFEPDYRLPGDLLRTSEYLTHPIFHMNRA
ETEMTRYIRRLSDRDLALDRAMIPLGSCTMKLNATAEMLPITWPEFSEIHPFVPADQAQG
YRHLIEDLSQKLCDITGYDAVSMQPNSGAQGEYAGLLTIRAYHLANGDTHRDVCLIPTSA
HGTNPASAQMAGMKVVVVKVSENGDIDMEDFRAKAEQYAQNLSCCMITYPSTHGVFEENV
REICDIVHSHGGQVYIDGANMNAMVGLARPGDIGGDVSHLNLHKTFCIPHGGGGPGMGPI
GVKAHLAPHLPESPLTGEAGAVSAAPFGSASILPISWSYCLMMGGAGLTQATKVAILNAN
YIAARLKGAYDVLYKSARGRVAHECIIDTRPLVDSAGVTVDDVAKRLIDCGFHAPTMSWP
VAGTLMIEPTESETKAEIDRFCDAMLAIREEACAIEEGRMDRANNPLKNAPHTVEDLVGE
WDRPYSREQACYPPGAFRVDKYWSPVNRVDNVYGDRNLVCSCPPLEDYADAAE
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgaaccttcccaaggacttcgccttcaccgattaccagccctacgatttcgccaaccgt
cgccatatcggcccgtcgccgaaggagatggaggcgatgctgaaggtgatcggctatgac
agcctcgatgcgctgatcgacgacaccgtgccgaaatcgatccgccagacgaaggcgctc
gaatggggtgccgcgatgaccgagcgcgaagcgctcgacaagctgcgcgagaccgccaac
cgcaacaggaagttcgtctccctgatcggccagggctattatggcacgatcacgccgccg
gtcatccagcgcaacatcctggaaaacccggcctggtacaccgcctacacgccctatcag
ccggaaatcagccagggtcgcctcgaggcgctcctgaactaccagacgatggtctgcgac
ctgaccggcctcgacgtggcgaatgcctcgcttctcgacgaggcgacggcagccgccgaa
gcgatggccatggcgcagcgtgtggcgaaatccaaggcgaccgcgttcttcgtggacgag
aactgccacccgcagacgatcgcactcctcaagacccgtgcggaaccgctcggctggcag
atcgtcgtcggcgaccccttcaccgatctcgatccggtcgacgtcttcggcgcgatcttc
cagtatcccggcacctatggccatgtgcgcgacttcaccggcctgaacgcgcgcctgcac
cagaccggcgcgatcgccgtcatggcggccgacccgctggcgctggcgctgctcaagtcg
cccggcgacatggatgccgacatcgccatcggctgcacgcagcgcttcggcgtccccgtc
ggctatggcgggccgcatgcggcctatatggctgtgaaggatgcctacaagcgctccatg
ccgggccgcctcgtcggcgtctccatcgacgcacgcggcaaccgtgcctaccgcctctcc
ctccagacccgcgaacagcacatccgccgcgaaaaggcgacgtcgaacatctgcaccgcg
caggtgctgctcgccgtcatggcctcgatgtatgccgtcttccatggtccgcagggcttg
aaggcgattgcccagagcgttcaccagaagacggtgcgccttgccaagggcttggaaaag
ctcggcttcacggtcgagcccgacatgttcttcgacacgatcaccgtccatgtcggcaag
ctgcagggcatcatcctgaagacggcggtggccgaagaggtgaacctgcgcaagatcggc
aacgaccgcatcggcatcagcctcgacgagcgttcgcgccccgtcacgctggaagccgtg
tggcgcgccttcggcggcgacttcgaggtctcggaattcgagccggattaccgcctgccg
ggcgatctgctgcgcaccagcgaatacctgacgcatccgatcttccacatgaaccgcgcg
gaaaccgagatgacgcgctatatccgccgcctctccgaccgcgacctcgcgctcgaccgg
gcgatgattccgctcggctcgtgcacgatgaagctcaacgcgacggcggaaatgctgccg
atcacctggccggagttttccgagatccatcccttcgtgccggccgaccaggcgcaggga
taccggcatctcatcgaggacctgtcgcagaagctctgcgacatcaccggctacgatgcc
gtctccatgcagccgaattccggcgcgcagggcgaatatgcggggctgctgacgatccgc
gcctatcacctcgccaatggcgacacacatcgcgacgtgtgcctcatcccgacctccgcg
cacggcaccaacccggcctccgcgcagatggccggcatgaaggtcgtcgtcgtgaaagtg
tccgagaacggcgatatcgacatggaggatttccgagcgaaagcagagcagtacgcgcaa
aacctctcgtgctgcatgatcacgtatccgtcgacccacggcgtgttcgaggagaatgtg
cgggagatctgcgacatcgtgcacagccatggcggccaggtctatatcgacggcgccaac
atgaacgccatggtgggccttgcccgccccggcgatatcggcggcgatgtctcgcatctc
aacctgcacaagaccttctgcattccgcatggcggcggcggcccgggaatgggaccgatc
ggcgtgaaggcccatctggcgccccacctgccggaaagcccgctgacgggcgaggccggc
gcggtttcggcagcacccttcggctcggcctcgatcctgccgatctcctggagctactgc
ctgatgatgggcggcgccgggctgacgcaggcgacgaaggtggcgatcctcaatgccaac
tacatcgccgcccgtctcaagggcgcctatgacgtgctctacaagtccgccaggggccgt
gtggcgcatgaatgcatcatcgacacgcgcccgctggtcgacagcgcgggcgtcaccgtc
gatgacgtggccaagcggctgatcgattgcggcttccacgcgcccaccatgagctggccg
gtcgcgggcacgctgatgatcgagccgacggaatcggagacgaaggccgagatcgaccgc
ttctgcgatgcgatgctggcgatccgcgaggaggcctgcgccatcgaggagggccggatg
gacagggccaacaatccgctgaaaaacgcaccgcacacggtggaagacctcgtcggcgaa
tgggatcgtccctattcgcgcgagcaggcctgctatccgccgggcgccttccgcgtcgac
aaatactggtcgccggtcaaccgcgtcgacaatgtctatggcgaccgcaacctcgtctgc
tcctgcccgccgctggaggactacgcggacgcggcggaatag
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