Shinella oryzae: K6301_07815
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Entry
K6301_07815 CDS
T08112
Symbol
rpsD
Name
(GenBank) 30S ribosomal protein S4
KO
K02986
small subunit ribosomal protein S4
Organism
soj
Shinella oryzae
Pathway
soj03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
K6301_07815 (rpsD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
soj03011
]
K6301_07815 (rpsD)
Ribosome [BR:
soj03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
K6301_07815 (rpsD)
Bacteria
K6301_07815 (rpsD)
Archaea
K6301_07815 (rpsD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_S4
S4
S4_2
SYY_C-terminal
YlmH_RBD
Motif
Other DBs
NCBI-ProteinID:
UPA26069
LinkDB
All DBs
Position
complement(1563224..1563841)
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AA seq
205 aa
AA seq
DB search
MSKRAASKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKSKLSDFGVQLRAKQKLKG
YYGDIREKQFRAIFAEAERRKGDTPENLIGLLESRLDAIVYRAKFVPTVFAARQFVNHGH
VKVNGVRVNIGSYRCKPGDVIEVKDKSKQLVTVLESVSLAERDVPDYIEVDHNKMVATFV
RVPVLSDVPYAVVMEPHLVVEFYSR
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagcgcgctgcatccaagtacaaaatcgaccgccgcatgggcgaaaacatctgg
ggccgtccgaagtccccggtcaaccgccgcgaatacggcccgggccagcacggccagcgc
cgcaagtccaagctttcggacttcggtgtgcagctgcgcgccaagcagaagctgaagggc
tactatggcgacatccgcgagaagcagttccgcgcgatcttcgctgaagccgaacgccgc
aagggcgacaccccggaaaacctgatcggcctgctcgaatcgcgcctggacgcgatcgtc
taccgcgccaagttcgttccgacggtcttcgctgcccgtcagttcgtcaaccacggccac
gtcaaggtcaacggtgttcgcgtcaacatcggctcctaccgttgcaagccgggcgacgtc
atcgaagtcaaggacaagtccaagcagctcgtcacggtcctcgaatccgtttcgctggct
gaacgcgacgttccggactacatcgaagtcgatcacaacaagatggtcgcgaccttcgtt
cgcgtcccggttctctccgacgtgccctacgccgtcgtcatggaaccgcacctggttgtc
gaattctactcgcgttaa
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