Shinella oryzae: K6301_07860
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Entry
K6301_07860 CDS
T08112
Symbol
alaS
Name
(GenBank) alanine--tRNA ligase
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
soj
Shinella oryzae
Pathway
soj00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
K6301_07860 (alaS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
soj01007
]
K6301_07860 (alaS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
soj03016
]
K6301_07860 (alaS)
Enzymes [BR:
soj01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
K6301_07860 (alaS)
Amino acid related enzymes [BR:
soj01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
K6301_07860 (alaS)
Transfer RNA biogenesis [BR:
soj03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
K6301_07860 (alaS)
Prokaryotic type
K6301_07860 (alaS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
tRNA_SAD
DHHA1
PUMA_CC
WXG100
Motif
Other DBs
NCBI-ProteinID:
UPA26077
LinkDB
All DBs
Position
complement(1572530..1575190)
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AA seq
886 aa
AA seq
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MSGVNDIRSTFLDYFRKNGHEVVASSPLVPRNDPTLMFTNAGMVQFKNVFTGLETRPYTK
ATTAQKVVRAGGKHNDLDNVGYTARHLTFFEMLGNFSFGDYFKEQAIEHAWTLVTKGFDL
PKDRLLVTVYADDDEAALLWKKIAGFSDDRIIRIPTSDNFWQMGDTGPCGPCSEIFIDQG
EHVWGGPPGSPEEDGDRFLEFWNLVFMQFDQTAPGERSPLPRPSIDTGMGLERMACILQG
VQSVFETDLFRTLIAAVEETVGTKAEGEAAASCRVIADHLRSSAFLIADGVLPSNEGRGY
VLRRIMRRAMRHMQLLGAKEPLMWSLLPALVGEMGRAYPELVRAEALISETLKLEETRFR
KTLERGLSLLSDATVTLKKGDMLDGETAFKLYDTYGFPLDLTQDALRAREINVDLFGFND
AMQRQKAEARANWSGSGDKATEAVWFELKEKHGATEFLGYDTETAEGVVQAIVVDGKAAG
SAKAGDSVQIVVNQTPFYGESGGQMGDSGIITSDNARLSVTDTQKKGEGLFVHSAVVESG
TLKLDDAVVLTVDHARRSRLRANHSATHLLHEALREVLGTHVAQKGSLVAPERLRFDVSH
PKPMTAEELRVIEDMANEIIVQNAPVTTRLMSVDDAIAEGAMALFGEKYGDEVRVVSMGT
GLHGAKANRPYSVELCGGTHVSATGEIGLVRILSESAVGSGVRRLEALTGEAARAYLAEQ
DERVKSLASALKVQPGEVLARVEALADERRKLERELTEAKKKLALSGGSAGGDDGVRDVA
GVKYLGKVVTGVEPKDLKSLADEGKKSLGSGVVAFIGVSPDGKASAVVAVTEDLTGRVSA
VDLVRVASEALGGKGGGGRPDMAQAGGPDGARAAEAIDAVAAAIGG
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcgtgaatgacatccggtcgacttttctcgactatttccgcaagaacgggcac
gaggtcgtggcctccagccccctcgtgccgcgtaacgacccgacgctcatgttcaccaat
gccggcatggtgcagttcaagaacgtcttcacggggctggagacgcggccctacaccaaa
gcgacgacggcccagaaggtcgtgcgcgccggcggcaagcacaacgatctcgacaatgtc
ggctataccgcgcgccatctgaccttcttcgagatgctcggcaacttctccttcggcgat
tacttcaaggagcaggcgatcgagcatgcctggacgctcgtcaccaagggcttcgacctg
ccgaaggatcgtcttctcgtcaccgtctacgccgatgacgacgaggccgcgctgctgtgg
aagaagatcgccggtttctccgacgaccgcatcatccgcatcccgacctccgacaatttc
tggcagatgggcgataccggtccctgcggcccctgctcggaaatcttcatcgaccagggc
gagcatgtctggggcggccctccaggctcgccggaagaggacggcgatcgtttcctggag
ttctggaacctcgtcttcatgcagttcgaccagaccgcacccggcgagcgcagcccgctg
ccgcgtccgtccatcgataccggcatgggcctggaacgcatggcctgcatcctccagggc
gtgcagagcgttttcgagacggacctgttccgcacgctgatcgccgcggtcgaggaaacg
gtgggcacgaaggccgagggcgaggccgccgcaagctgccgcgtcatcgccgatcacctg
cgctcgtccgctttcctgatcgccgacggcgtgctgccctcgaatgagggccgcggctat
gtcctgcgccgcatcatgcgccgcgccatgcgccacatgcagctgctcggcgccaaggag
ccgctgatgtggtcgcttctgccggccctcgtcggcgagatgggtcgcgcctatccggag
ctcgtgcgcgccgaggcgctgatttccgagacgctgaagctcgaggaaacccgtttccgc
aagacgctggagcgcggcctctcgctgctgtcggacgccaccgtcacgctcaagaagggt
gacatgctggacggcgaaaccgccttcaagctctacgacacctacggcttcccgctcgac
ctgacacaggatgcactgcgcgcccgcgagatcaatgtcgatctcttcggcttcaacgat
gcgatgcagcgccagaaggccgaggcccgcgccaactggtcgggttcgggcgacaaggcg
accgaggccgtctggttcgaattgaaggaaaagcacggtgcgaccgaattcctcggctac
gacaccgaaaccgccgaaggcgtggttcaggccatcgtcgtcgacggcaaggccgccggc
agcgccaaggccggcgacagcgtgcagatcgtcgtgaaccagaccccgttctacggcgaa
tccggtggccagatgggcgattccggtatcatcacctcggacaatgcccgcctttccgtc
accgatacgcagaagaagggtgagggactgttcgtgcacagcgccgtcgtcgagagcggc
acgctgaagctcgacgatgcggtcgtgctcacggtcgatcatgcgcgccgttcgcgcctg
cgcgccaaccactccgccacgcacctgctgcacgaggcgctgcgcgaggtcctgggcacc
catgtcgcccagaagggttcgctcgtggcgcccgagcgcctgcgcttcgacgtttcgcat
cccaagccgatgaccgccgaggaactgcgcgtcatcgaggacatggccaacgagatcatc
gtgcagaacgcgccggtcaccacccgcctgatgtcggtggatgatgccattgcggaaggc
gccatggcgctgttcggcgaaaagtacggggatgaggtccgcgtcgtctccatgggcacc
ggcctgcacggcgccaaggcgaaccggccctattcggtcgagctttgcggcggcacgcat
gtctccgccaccggtgagatcggccttgttcgcatcctctcggaaagtgccgtcggctcg
ggcgtgcgccgcctggaggcgctgacgggcgaagccgctcgcgcctatctcgccgagcag
gacgagcgcgtgaagtcgcttgccagtgcactgaaggtgcagcctggtgaggttctggcc
cgcgtcgaggcgcttgcggacgaacgccgcaagctcgaacgcgagctgaccgaggccaag
aagaagcttgccctgtccggcggctcggccggcggtgacgatggcgtgcgggatgtcgcc
ggggtcaagtatctcggcaaggtcgtgaccggcgtcgagccgaaggacctgaagagcctg
gccgacgagggcaagaagagcctgggctccggcgtcgtcgcctttatcggcgtctcgccg
gatggcaaggcgagcgccgtcgtggccgtcaccgaggacctgaccggccgcgtcagcgcc
gtcgatctcgtgcgcgtcgcctccgaagcgctcggcggcaagggcggcggcgggcgtccc
gacatggcgcaggccggcgggcccgatggcgccagagcggccgaggcgatcgacgccgtg
gcggctgccatcggcggctga
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