Shinella oryzae: K6301_07880
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Entry
K6301_07880 CDS
T08112
Name
(GenBank) response regulator
KO
K13587
two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:
2.7.13.3
]
Organism
soj
Shinella oryzae
Pathway
soj02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
K6301_07880
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
soj01001
]
K6301_07880
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
soj02022
]
K6301_07880
Enzymes [BR:
soj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
K6301_07880
Protein kinases [BR:
soj01001
]
Histidine kinases
Cell cycle family [OT]
K6301_07880
Two-component system [BR:
soj02022
]
Cell cycle family
CckA-CtrA/CpdR (cell cycle control)
K6301_07880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
Response_reg
PAS_8
PAS_4
PAS
PAS_9
HisKA
HPTransfase
DUF3240
PAS_10
Motif
Other DBs
NCBI-ProteinID:
UPA26081
LinkDB
All DBs
Position
complement(1579248..1581860)
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AA seq
870 aa
AA seq
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MTTMKRPGDDNLPIVDRGLRPAMALRVVLLAVVLAASAGAFIVFKNQLDNELVLGVLGVL
AMAGIFFVVSALIGFIEFMPEPAGADDLAHAFLDSHPDGTVITDRKGRIVYANAAYGALT
GAKGDAEVQSLETLLSRNRDATEAVYRLTNGLHEGKEGAEEFRVQKSLDASASAGSGAHW
YRLKARVLPNGKKAGRPLYIWQISDITSERDDQERFFKELQNAIDYLDHAPAGFFSAGRK
GEIVYLNATLAEWLGIDLTKFHPGSLSIADVVAGEGLALIQSVQAEPGLKRTETLDLDLR
KTNGQSLPVRIVHRVSSMRDGAPGDSRTIVLAREEGGEADQSASIASMRFTRFFNNTPMA
IASVDGNGRILRTNAPFLKLFSGVVSRDDIDRGAKLETIVHETDRLRLQAAFDAAKDRQG
DIPPIDSLHPADDGRHFRFYVNAVIDQSDEAPEEAAIVYAVEITEQKALETQMAQTQKMN
AVGTLAGGIAHDFNNVLTAILLSSDHLLLSARPADASFADLMEIKRNANRAAVLVRQLLA
FSRKQTMRPTVLNLTDVIGDLRMLVDRMTGTNVKINVDYGRDLWTVKTDLGQFEQVLINL
AVNARDAMPDGGTITFRTRNVEAEEAAARNLRDLPPGDYVEVEVSDQGTGIPPEIIDKIF
EPFFTTKDVGKGTGLGLSMVYGIVKQTGGYIYLDSEVGKGTTFRILLPRHVEEAVPVDTA
ADAAQTGAQPVASVAQIAEKEPRDLTGGSAVVLLVEDEEAVRRGGKRMLETRGYTVHEAG
SGVEALDIMDELNGAVDIVVSDVVMPEMDGPSLLRELRKSYPDLKFIFVSGYAEDAFARN
LPADAKFGFLPKPFSLKQLAEAVREMLDEG
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgatgaaacggccgggcgacgacaatctgccgatcgtggaccgcggcttgcgg
ccggcgatggcgcttcgcgtcgtgctgctggccgtcgtgctggcggcctcggccggcgcc
ttcatcgttttcaagaaccagctcgacaatgaactcgtgctcggcgtgctgggcgtgctg
gccatggcgggcatcttcttcgtcgtgtcagcgctgatcggcttcatcgagttcatgccg
gaacccgccggtgccgacgatctcgcgcatgcctttctcgacagccatcccgacggcacg
gtcatcacggaccgcaagggacgcatcgtctatgccaatgccgcctatggcgcgctgacc
ggcgccaagggtgacgcggaagtgcagtcgctcgagacgctgctgtcgcgcaaccgcgac
gccacggaagccgtctaccgcctcaccaacggcctgcacgagggcaaggagggggccgag
gaattccgtgtccagaaatccctcgacgcgtccgcctcggccggttccggcgcgcactgg
tatcggttgaaggcccgcgtgctgccgaacggcaagaaggccgggcggccgctctatatc
tggcagatttcggatatcacctcggagcgcgacgatcaggagcggttcttcaaggagctg
cagaacgcgatcgattatctcgaccacgcgcccgccggcttcttctccgccggccgcaag
ggcgagatcgtctatctcaacgcgacgctcgcggagtggctgggcatcgacctcacgaag
ttccatccgggatcgctgtcgatcgccgatgtggtggcgggcgaggggcttgcgctcatc
cagtccgtgcaggccgagcctggcctgaagcgcaccgagacgctcgatctcgacctgcgc
aagacgaatggccagagcctgccggtgcgcatcgtgcatcgcgtgtcctccatgcgcgac
ggtgcgcccggcgacagccgcaccatcgttctggcgcgcgaggagggcggcgaggccgac
cagtccgcgtcgatcgcctccatgcgtttcacgcgtttcttcaacaacacgccgatggcg
atcgcctccgtcgacggcaatggccgcatcctgcgcactaatgcgccgttcctgaagctg
ttttccggcgtcgtgtcgcgtgacgacatcgatcgcggcgccaagctcgagaccatcgtg
cacgagacggaccggctgcgcctccaggcggcattcgatgcggccaaggaccggcagggc
gatatcccgccgatcgattcgctgcatcccgccgacgacgggcggcatttccgtttctac
gtgaacgccgtcatcgaccagagcgacgaggcgccggaggaggcggccatcgtctacgcc
gtggagatcaccgagcagaaggcgctcgagacccagatggcgcagacccagaagatgaac
gcggtgggaacgctcgccggcggcatcgcacacgatttcaacaacgtgctgacggccatc
ctgctctcgtccgaccatttgctgctgtcggcgcgccccgccgacgcgagctttgccgat
ctcatggagatcaagcgcaacgccaaccgcgccgcggtgctggtgcgccagttgctcgcc
ttctcgcgcaagcagacgatgcgcccgacggtgctcaacctgaccgacgtgatcggcgac
ctgcgcatgctggtcgaccggatgaccggcacgaatgtgaagatcaatgtcgattacggc
cgcgacctgtggacggtgaagacggatctcggccagttcgagcaggtgctgatcaacctc
gccgtcaacgcccgcgatgccatgccggatggcggcaccatcacgttccgcacccgcaac
gtggaggccgaggaggccgctgcccgcaacctgcgcgacctgccgcccggcgactatgtc
gaagtggaggtttccgaccagggaacgggcataccgcccgagatcatcgacaagatcttc
gagcccttcttcacgaccaaggatgtcggcaagggcacgggcctcggcctctcgatggtc
tacggcatcgtcaagcagaccggcggctacatctatctggattcggaagtcggcaagggc
acgaccttccgcatcctgctgccgcgccatgtggaagaggccgttcccgtcgataccgcc
gccgacgccgcgcaaaccggcgcccagccggtcgcatccgtcgcgcagatcgccgaaaag
gagccgcgcgacctcacaggcggttcggccgtcgtgcttctcgtcgaggatgaggaagcc
gtccgccgcggcggaaagcgcatgctggaaacccgcggctatacggtgcacgaggccggg
tcgggcgtggaagcgctcgacatcatggacgaattgaacggcgccgtcgatatcgtcgta
tccgacgtcgtgatgcccgaaatggacgggccgtctctgctgcgcgaactgcgcaaatcc
tatccggatctcaagttcatcttcgtctcgggttacgccgaggacgccttcgcccgcaac
ctgcccgccgacgccaagttcggcttcctgccaaaaccgttctcgctgaagcagctggct
gaggccgtgcgggaaatgctcgacgaggggtaa
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