Shinella oryzae: K6301_08090
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Entry
K6301_08090 CDS
T08112
Symbol
fumC
Name
(GenBank) class II fumarate hydratase
KO
K01679
fumarate hydratase, class II [EC:
4.2.1.2
]
Organism
soj
Shinella oryzae
Pathway
soj00020
Citrate cycle (TCA cycle)
soj00620
Pyruvate metabolism
soj00720
Other carbon fixation pathways
soj01100
Metabolic pathways
soj01110
Biosynthesis of secondary metabolites
soj01120
Microbial metabolism in diverse environments
soj01200
Carbon metabolism
Module
soj_M00009
Citrate cycle (TCA cycle, Krebs cycle)
soj_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
K6301_08090 (fumC)
00620 Pyruvate metabolism
K6301_08090 (fumC)
09102 Energy metabolism
00720 Other carbon fixation pathways
K6301_08090 (fumC)
Enzymes [BR:
soj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.2 fumarate hydratase
K6301_08090 (fumC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lyase_1
FumaraseC_C
PPP1R21_helical
Motif
Other DBs
NCBI-ProteinID:
UPA26123
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All DBs
Position
1630810..1632201
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AA seq
463 aa
AA seq
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MTSTRTETDTFGPIEVDNSRYWGAQAQRSLGNFKIGWEKQPLSVVRALGIVKQAAARANM
ELGRLDPAIGKAIVEAAQEVIDGKLNDHFPLVVWQTGSGTQSNMNANEVISNRAIEMLGG
VMGSKKPVHPNDHVNMSQSSNDTYPTAMHIACAERIVHDLLPALKHLHAALEAKVKAFDH
IIKIGRTHTQDATPLTLGQEFSGYAAQVASSIKRIELTLPGLCELAQGGTAVGTGLNAPI
GFAEKVADHIAEITGIAFKTAPNKFEALAAHDSMVFSHGAINAAAAALFKIANDIRFLGS
GPRSGLGELALPENEPGSSIMPGKVNPTQCEALTQVCAQVFGNHASLTFAGSQGHFELNV
FNPLMAYNFLQSVQLLSDAAISFTDNCVVGIEAREDNIKAALDRSLMLVTALAPKIGYDN
AAKIAKTAHKNGTTLREEAVGGGYVTNEEFDAVVRPEKMIMPG
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgacatcgacgcgcacggaaacggatacattcggccccatcgaagtggacaacagccgc
tattggggcgcgcaggcccagcgctcgctcggcaatttcaagatcggctgggaaaagcag
ccgctctccgtcgtgcgcgcgctcggcatcgtcaagcaggccgccgcccgcgccaacatg
gaactgggccgtctcgatccggccatcggcaaggcaatcgtcgaagccgcacaggaagtc
atcgacggcaagctcaacgatcacttcccgcttgtcgtctggcagaccggctcgggcacc
caatccaacatgaacgccaatgaggtcatctccaaccgggccatcgaaatgctcggcggc
gtcatgggctccaagaagccggtgcaccccaacgaccacgtcaacatgagccagtcgtcc
aacgacacctatccgacggccatgcacatcgcctgcgccgagcgcatcgttcatgacctg
ctgccggcgctgaagcacctgcatgcggcgctggaagccaaggtcaaggcgttcgaccac
atcatcaagatcggccgcacgcacacgcaggacgccaccccgctgacgctcggccaggaa
ttctccggctatgccgcgcaggtcgcctcctccatcaagcgcatcgaattgacgcttccg
ggcctgtgcgaactcgcccagggcggcaccgccgtcggcaccggcctcaacgcgccgatc
ggcttcgccgaaaaggtcgccgatcacatcgccgagattaccggcatcgccttcaagacc
gcgccgaacaagttcgaggcgctcgccgcccatgattccatggtcttctcgcatggcgcg
atcaatgcggccgccgcggccctcttcaagatcgccaacgacatccgcttcctcggctcg
ggcccgcgctcgggcctcggcgaactcgccctgccggaaaacgagcccggctcgtcgatc
atgcccggcaaggtcaaccccacccagtgcgaagccctcacccaggtctgcgcccaggtg
ttcggcaaccacgcctcgctgaccttcgccggcagccagggccatttcgagctgaacgtc
ttcaacccgctgatggcctataacttcctgcagtcggtgcagctgctgtcggatgcggcg
atctcgtttaccgacaattgcgtcgtcggcatcgaggcgcgcgaggacaacatcaaggcc
gcactcgaccgttcgctgatgctcgtgaccgcgctcgccccgaagatcggctacgacaac
gccgccaagatcgccaagacggcccacaagaacggcaccacgttgcgtgaggaagccgtc
ggcggcggttacgtcaccaatgaggaattcgatgcggtcgttcgccccgaaaagatgatc
atgcccggctga
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