Shinella oryzae: K6301_08175
Help
Entry
K6301_08175 CDS
T08112
Name
(GenBank) OmpA family protein
Organism
soj
Shinella oryzae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
Motif
Other DBs
NCBI-ProteinID:
UPA26138
LinkDB
All DBs
Position
complement(1648187..1650316)
Genome browser
AA seq
709 aa
AA seq
DB search
MTFRSKLFATVAFPVLSASLIATPALADALMKPFEVAQDSGEQAQPSEEELLQQRQAEEQ
RAAEEEAQRQAEEQQRAAEEEAQRAAEEQQKAAEQEAQRQAEEQQKAADEEAQRQAEEQQ
RAAEEEAQRAAEEQQKAADEEAQRAAAEQQKAADEEAQRQAEEQQKAADEEAQRAAEEQQ
KAADEEAQRAAAEQQKAADEEAQRQAEEQQKAAEEQQQQTEQQPAEEQPVEQQPAIVTDE
QQQPADGSTAEQPAEAGTEQPATAETGETPAGEPVPEVVDTLSPEEKQAIAEDPGKTDET
VVLPVENGAAVLDSDKDADNTGGRMSREERRKQREELRAQEEVPLPASDDSAQAEIPQEV
REAVPQKIEAAIKEEGQRVDAAPVFAVPETTNIVNNTVINNTVINNNTVNNTVNNNTVNN
NVTQVNVVETIDNRTVLSVGNQLIVRGDDRPRLRRDSEEVYYDELARGRTRETIVRPGGV
QIITIYNRYGDVIQRSRIGRDGREYILVYAPELEDDAPRPDLVDVGYELPPMRLRIPLRD
YIVDTSSDPDRDYYEFLSEPPVERVERVYTINEVKQSARLRDKVRRIDLDTVTFATGSAE
VPMSQARTLRKVAEAMSKILDKDPGETFLIEGHTDAVGSDKSNLVLSDRRADSVASLLTE
VYGIPPENLQTQGYGERFLKVRTQSAEQQNRRVTIRRVTTLVRPVASAN
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgactttccgctcaaaacttttcgcaaccgtggcgttcccggtgctttccgcgtcgctg
atcgcgacgccggcactcgccgatgccctcatgaagccgttcgaagtcgcccaggacagc
ggcgagcaggcccagccgtccgaagaagagctgctgcagcagcgccaggccgaagaacag
cgcgccgccgaggaagaggcgcagcgccaggccgaagagcagcagcgcgccgccgaggaa
gaagcccagcgcgcggccgaagagcagcagaaggctgccgagcaggaagcccagcgccag
gctgaggaacagcagaaggccgccgacgaagaggcacagcgccaggccgaagaacagcag
cgcgccgccgaggaagaagcccagcgcgcggctgaggagcagcagaaggccgccgacgag
gaagcccagcgcgcggccgccgagcagcagaaggctgccgacgaggaggcccagcgtcag
gccgaggaacagcagaaggctgccgacgaggaggcccagcgcgcggccgaggaacagcag
aaggccgctgacgaagaagcccagcgtgcagccgccgagcagcagaaggctgccgacgag
gaagcccagcgtcaggctgaagaacagcagaaggccgccgaggaacagcagcagcagacc
gagcagcagccggcggaagaacagcccgtcgagcagcagccggcgatcgtgaccgacgag
cagcagcagcccgccgacggtagcacggcggagcagcccgctgaagccggcaccgagcag
ccggcaacggccgagaccggtgaaacgcctgccggcgagccggttccggaagtcgtcgac
acgctttcgcctgaggaaaagcaggccattgccgaggacccgggcaagacggacgaaacc
gtcgtgctgccggtcgaaaacggtgctgccgtgctcgacagcgacaaggacgccgacaat
accggtggccgcatgagccgcgaggagcgccgcaagcagcgcgaggagctgcgcgcccag
gaagaggttccgctgccggcttccgacgattcggcgcaggccgaaattccgcaggaggtc
cgtgaggccgttccgcagaagatcgaggccgccatcaaggaagagggccagcgtgtcgac
gccgcgccggtcttcgcggtgccggagacgaccaacatcgtcaacaacaccgtgatcaac
aacacggtcatcaacaacaacaccgtcaataacactgtgaacaacaacacggtgaacaac
aacgtgacgcaggtgaacgtggtcgagacgatcgataaccgcaccgttctgtcggtcggc
aaccagctgatcgtgcgtggcgacgaccgtccgcgcctgcgccgcgattccgaggaagtc
tattacgacgagctcgcccggggccgcacgcgtgaaaccatcgttcgtcccggcggcgtg
cagatcatcacgatctacaatcgctacggcgacgtcatccagcgctcgcgcatcggccgc
gacggccgcgagtatatcctcgtctatgcgccggaactggaagacgatgcaccgcgcccc
gacctcgtggacgttggctacgagctgccgccgatgcgcctgcgcattccgctgcgcgac
tatatcgtcgacacctcgagcgacccggatcgcgactactacgagttcctctccgagccg
ccggtagaacgggtggagcgcgtctacacgatcaacgaggtgaagcagtccgcccgcctg
cgtgacaaggtccgccgtatcgacctggataccgtgaccttcgccaccggaagcgcggaa
gtgccgatgtcgcaggcacgcacgctgcgcaaggtcgcggaggcgatgtcgaagatcctg
gacaaggatccgggcgagaccttcctcatcgaaggccatacggacgccgtcggttcggac
aagtcgaacctcgtcctgtcggaccgccgcgccgactccgtcgccagcctgctcaccgag
gtctacggcatcccgccggaaaacctccagacgcagggttacggcgagcgcttcctgaag
gtgcgcacgcagtctgccgaacaacagaaccgccgtgtgaccatccgccgtgtgaccacg
ctggtccgcccggtcgccagcgcgaactga
DBGET
integrated database retrieval system
