Shinella oryzae: K6301_08545
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Entry
K6301_08545 CDS
T08112
Symbol
cobD
Name
(GenBank) threonine-phosphate decarboxylase CobD
KO
K02225
cobalamin biosynthesis protein CobC
Organism
soj
Shinella oryzae
Pathway
soj00860
Porphyrin metabolism
soj01100
Metabolic pathways
soj01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
K6301_08545 (cobD)
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GFIT
Motif
Pfam:
Aminotran_1_2
DUF2017
Motif
Other DBs
NCBI-ProteinID:
UPA23254
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Position
complement(1722228..1723235)
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AA seq
335 aa
AA seq
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MTAPPIVHGGGIAAAAARFGGKPEDWLDLSTGINPNPVAVPEIDAAAWHRLPDRHRQDAA
RAAAARYYRTPHVLPLPVPGTQSVIQLLPRLVPAGRRAAVLSPTYGEYARVLENAGIAVD
RVDGIDAVTEAHGLVVVVNPNNPDGRFVPRETLLDLHRRVEASGGILLVDEAFGDMRPDD
CIAPLAGDDRPGLLVFRSFGKFFGLAGLRLGFVAGPSAVLETLADGLGPWAVSGPALTIA
TTLMASDTTPIRHAIQQRKSALDQVLAEAGLVSAGGTGLFSLVEHASAKALHQHLCRHHI
LVRPFDYHARWLRFGLTPDEASDTRLAAALRDFAG
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgccgcctattgtccatggcggaggtattgccgcggcggcggcgcgcttcggc
ggcaagccggaggactggcttgatctttccaccggcatcaaccccaatcccgtcgccgtt
cccgagatcgacgccgccgcctggcatcgcctgccggatcggcatcggcaggacgccgct
cgcgccgccgccgcccgctattatcgcacgccgcacgtcctgccgctgcccgtgcccggc
acgcaatccgtcatccagcttctgccgcgccttgtgccggcgggccggcgcgccgccgtc
ctgtcgccgacctatggcgaatatgcccgcgtgctggagaatgccggcatcgccgtcgac
cgggtggacggcatcgatgcagtgacggaagcgcacggcctcgtggtggtcgtcaatccg
aacaatccggatggccgcttcgtcccgcgcgaaacccttctggacctccatcgccgggtc
gaggcgtcgggcggcattttgctcgtcgacgaggctttcggcgatatgcggcccgatgac
tgcatcgcgccgcttgccggcgatgacagacccggtcttctcgtcttccgctccttcgga
aaattcttcggccttgccggccttcggctgggcttcgtcgccggaccgtccgccgttctg
gaaacgttggccgatggcctcggaccctgggccgtgtcgggcccggcgctgaccatcgcg
acaacgctgatggcctccgatacgacgccaatccggcatgccatccagcagcgcaagtcg
gcgctcgatcaggtccttgccgaagccgggttggtgtcggccggcggcaccggcctgttt
tcgctggtcgaacacgcgtcggccaaggccctgcaccagcatctctgccgccaccatatc
ctcgtgcgtcccttcgactatcatgcgcgctggctgcgcttcggtctcacgccggatgag
gcgtccgacacccgtctggcagcggcccttcgtgattttgcgggctga
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