Shinella oryzae: K6301_08945
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Entry
K6301_08945 CDS
T08112
Name
(GenBank) DegQ family serine endoprotease
KO
K04771
serine protease Do [EC:
3.4.21.107
]
Organism
soj
Shinella oryzae
Pathway
soj01503
Cationic antimicrobial peptide (CAMP) resistance
soj02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
K6301_08945
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
K6301_08945
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
soj01002
]
K6301_08945
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
soj03110
]
K6301_08945
Enzymes [BR:
soj01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.107 peptidase Do
K6301_08945
Peptidases and inhibitors [BR:
soj01002
]
Serine peptidases
Family S1: chymotrypsin family
K6301_08945
Chaperones and folding catalysts [BR:
soj03110
]
Other chaperones and cochaperones
DegP / HtrA
K6301_08945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trypsin_2
PDZ_2
Trypsin
PDZ
PDZ_6
Peptidase_S46
Peptidase_S29
DUF6288
Motif
Other DBs
NCBI-ProteinID:
UPA23328
LinkDB
All DBs
Position
complement(1802393..1803922)
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AA seq
509 aa
AA seq
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MALKMKSSVANAALTLAMSFSLAAGPLAAPAMAQARQVGPESVADLAEGLLDAVVNISTS
QNVKNEDKAPMPQVPEGSPFQDFFDEFFKGDGGEGSNQGQTVNSLGSGFVIDPAGYIATN
NHVIEGADDIEVNFANGSKLKAKLVGTDPKTDLALLKVEPKAPLKAVPFGDSRVMRIGDW
VMAIGNPFGLGGSVTVGIISARGRNINAGPYDNFIQTDAAINRGNSGGPLFNMKGEVIGI
NTAIISPSGGSIGIGFSVPTELAQNIFSQLREFGETRRGWLGVRIQPVTDDIAESLGMSE
AKGALVAGIIKGGPVDNGVIQTGDVVVRFDGKDVHEMRDLPRVVAESPVGKAVDVVLLRN
GKEMTVKVTLGRLEDGEKQVDAEDDAATPDEGTTEEDTTTDGEELAEPQKAELVLGMGIG
DLDEAARKTFNIVESVKGVVITEVAPDTAAAERGIVPGDVIVEIGQEAVATAEEVKARVA
KLKSEDRRNALLMIADRTGALRYITVRID
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggccttgaagatgaagtccagcgttgccaatgcggcgctcacgcttgcgatgagcttt
tcgctggccgccggcccgctcgcagcaccggcaatggcccaggcgcgccaggtcggaccg
gaatcggtggccgaccttgcggaaggcctgctggacgcggtggtcaacatttcgacctcg
cagaacgtgaagaacgaggacaaggcgccgatgccgcaggtgccggaaggctcgcccttc
caggacttcttcgatgagttcttcaagggcgacggcggcgagggctccaaccagggacag
actgtcaactcgctcggctcgggtttcgtcatcgatcccgcaggctatatcgccaccaac
aatcacgtcatcgaaggcgccgacgatatcgaggtgaatttcgccaacggctccaagctg
aaggccaagctcgtcggaaccgatccgaagaccgatcttgcgctgctgaaggtcgagccg
aaggctcccttgaaggccgttccgttcggtgattcccgcgtcatgcgcatcggcgactgg
gtcatggccatcggcaaccccttcgggctcggtggttcggtgacggtcggcatcatttcc
gcgcgcggccgcaacatcaatgccggcccctatgacaacttcatccagaccgacgcggcc
atcaaccgcggcaattcgggtggcccgctgttcaatatgaagggcgaggtcatcggcatc
aacacggccatcatctcgccgtcgggcggctcgatcggtatcggcttctcggttccgacg
gagctggcgcagaacatcttctcgcagcttcgcgagttcggcgagacccgccgcggctgg
ctcggcgtgcgtatccagcccgttacggacgatatcgccgaaagcctgggcatgagcgag
gcgaagggtgcgctcgttgccggcatcatcaagggcgggcccgtcgacaacggcgtgatc
cagaccggcgacgtcgtcgtccgtttcgacgggaaggacgtgcacgaaatgcgcgatctg
ccgcgcgtcgtcgccgaaagccccgtcggcaaggccgtcgacgtggtgctcctgcgcaac
ggcaaggaaatgacggtgaaggtcacgctcggccgtctcgaagacggcgaaaagcaggtg
gatgccgaggacgatgcggcaacgccggacgagggcacgaccgaagaggatacgacgacc
gacggcgaagagctggccgagccgcagaaggccgagctggtgctgggcatgggcatcggc
gatctcgacgaagccgcccgcaagaccttcaatatcgtggaaagcgtcaagggcgttgtc
atcaccgaggtagcccccgacacggcggccgccgagcgtggcatcgtgccgggcgacgtg
attgtcgagatcggtcaggaggccgtggcgacggccgaggaggtcaaggcccgcgtcgcc
aagctcaagtcggaagatcgccgcaacgcgctcctgatgatcgcagaccgcaccggcgcg
ctgcgctacatcacagtgcgcatcgactga
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