Shinella oryzae: K6301_09090
Help
Entry
K6301_09090 CDS
T08112
Name
(GenBank) ABC transporter substrate-binding protein
KO
K10117
raffinose/stachyose/melibiose transport system substrate-binding protein
Organism
soj
Shinella oryzae
Pathway
soj02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
K6301_09090
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soj02000
]
K6301_09090
Transporters [BR:
soj02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Raffinose/stachyose/melibiose transporter
K6301_09090
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SBP_bac_1
SBP_bac_8
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
UPA23353
LinkDB
All DBs
Position
complement(1840102..1841361)
Genome browser
AA seq
419 aa
AA seq
DB search
MTRNAIKGLLLASSMLGTAGLAQAQDVTLTVESWRNDDLSIWQEKIIPAFEAKNPGIKVV
FSPSAPTEYNAALNAKLDAGSAGDLITCRPFDASLELFNKKHLVGLNDLPGMENFSDVAK
SAWTTDDGATTFCVPMASVIHGFIYNADAFAEVGVEVPKTEAEFFAVLDKIKENGNYTPM
AMGTKDLWEAATMGYQNIGPTYWKGEEGRKALIAGTEKLTDAPWVEPFRVLAKWKDYLGD
GFEAQTYPDSQNLFTLGRAAIYPAGSWEIGLFNTQAQFKMGAFPPPVKNEGDTCYISDHN
DIGIGLNAKSPNAEAAKKFLTFVASPEFADIYANSLPGFFSLNSTAVKMNDPLAQEFVSW
REKCKPTIRSTYQILSRGTPNLENETWTESANVINGTDTPEVAAEKLQKGLDSWYKPAK
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgacacgcaacgcaatcaagggcctgcttctggcctccagcatgctcggcacggccggg
cttgcgcaggcgcaggacgtgacgctgacggtggaaagctggcgtaacgacgacctgtcg
atctggcaggagaagatcatcccggccttcgaagcgaagaacccgggcatcaaggtcgtc
ttctcgccgtcggccccgacggagtacaatgccgcgctcaacgccaagctcgacgccggc
tcggcgggcgatctcatcacctgccgtccgttcgacgcctcgctcgaactcttcaacaag
aagcacctcgtcggcctgaacgatctgccgggtatggagaacttctccgacgtcgccaag
tccgcctggacgacggacgatggcgcgacgaccttctgcgtgccgatggcatcggtcatc
cacggcttcatctacaatgcagacgccttcgcggaagtcggcgtggaagtgccgaagacc
gaagccgagttcttcgcggtcctcgacaagatcaaggaaaacggcaactacacgccgatg
gccatgggcacgaaggacctctgggaagccgccaccatgggctaccagaacatcggcccg
acctactggaagggcgaggaaggccgcaaggcgctgatcgccggcactgagaagctgacc
gacgcgccttgggtcgagccgttccgcgttctcgccaagtggaaggattatctcggcgac
ggcttcgaggcgcagacctatcccgacagccagaacctcttcacgctcggccgcgcggcg
atctatccggccggctcgtgggaaatcggcctgttcaacacgcaggcccagttcaagatg
ggtgcgttcccgccgccggtgaagaacgaaggcgatacctgctacatctccgaccataac
gacatcggcatcggcctcaacgccaagagcccgaatgcggaagccgcgaagaaattcctg
accttcgtcgcctcgcccgagttcgccgatatctatgccaactcgctgccgggcttcttc
agcctgaattcgacggcggtgaagatgaacgacccgctggcgcaggaattcgtttcctgg
cgcgagaagtgcaagccgacgatccgctcgacctaccagatcctgtcgcgtggcacgccg
aacctggaaaacgagacctggacggaatccgccaacgtcatcaacggcacggacacgccg
gaagtcgctgcggaaaagctccagaagggcctcgacagctggtacaagcccgcgaagtaa
DBGET
integrated database retrieval system
