Shinella oryzae: K6301_09245
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Entry
K6301_09245 CDS
T08112
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
soj
Shinella oryzae
Pathway
soj00470
D-Amino acid metabolism
soj00550
Peptidoglycan biosynthesis
soj01100
Metabolic pathways
soj01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
K6301_09245
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
K6301_09245
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
K6301_09245
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
soj01011
]
K6301_09245
Enzymes [BR:
soj01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
K6301_09245
Peptidoglycan biosynthesis and degradation proteins [BR:
soj01011
]
Precursor biosynthesis
Amino acid ligase
K6301_09245
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_4
ATP-grasp
ATP-grasp_3
CPSase_L_D2
Motif
Other DBs
NCBI-ProteinID:
UPA23383
LinkDB
All DBs
Position
complement(1872089..1873015)
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AA seq
308 aa
AA seq
DB search
MSVKHVAMLMGGFSSERPVSLSSGNACADALEAEGYKVTRVDVDHDVATVLAELKPDVAF
NALHGPFGEDGTIQGLLEFLQIPYTHSGVLASALAMDKAQAKIVAKAAGIPVAEQRLMNR
FDFTSAHPLTPPYVVKPVREGSSFGVVMVKEDQSHPPQIITSEEWRYGDAVMVERYVYGR
ELTCGVMGDVALGVTEVVPQGHAFYDYDSKYVKGGSKHIIPAQISPNIYQKVQTLALKAH
QAIGCRGVSRSDFRYDDRFSENGELIWLEINTQPGMTPTSLVPEMAVHAGHSFGEFLSWM
VEDASCLR
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtaaagcatgtcgcgatgctgatgggtggtttttcgtcggaacggccggtgagc
ctttcgtcgggcaacgcctgcgccgacgcgcttgaggccgagggctacaaggtcacgcgc
gtcgatgtcgatcacgacgtcgcaaccgttcttgccgaactgaaaccggatgtcgccttc
aatgcgctgcacgggccgttcggcgaggacggcaccatccaggggctgctcgagttcctg
cagatcccctatacccattccggcgtgcttgcctccgcgcttgccatggacaaggcgcag
gccaagatcgtcgccaaggccgccggcattccggtcgccgagcagcggctgatgaaccgt
ttcgatttcacctccgcgcatccgctgacgccgccctatgtggtgaagcccgtgcgcgag
ggctcgtccttcggcgtcgtcatggtcaaggaagaccagtcgcacccgccgcagatcatc
acctcggaagaatggcgctatggcgatgcggtcatggtcgagcgctatgtctacggccgt
gaactgacctgcggcgtcatgggcgatgtcgcgctcggcgtcaccgaagtggtgccgcag
ggccacgccttctacgactatgattcgaaatacgtgaaaggtggctcgaaacacatcatt
ccggcgcagatttcaccgaatatttaccaaaaagtacaaacactcgcactcaaggcgcat
caagcgatcgggtgccgtggcgtcagccgttccgacttccgctacgacgaccgtttttca
gagaatggcgagcttatctggctggagatcaacacccagcccggcatgacccccacctcc
ctggtgcctgaaatggccgtccatgccggccactcttttggtgaattcttgagttggatg
gtggaggacgcgtcgtgtttgcgttga
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