Shinella oryzae: K6301_09510
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Entry
K6301_09510 CDS
T08112
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
soj
Shinella oryzae
Pathway
soj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
K6301_09510
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soj02000
]
K6301_09510
Transporters [BR:
soj02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
K6301_09510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
TOBE_2
ABC_ATPase
SMC_N
AAA
AAA_22
ORC-CDC6-like
Rad17
nSTAND3
NB-ARC
AAA_28
AAA_25
RsgA_GTPase
AAA_23
Motif
Other DBs
NCBI-ProteinID:
UPA23432
LinkDB
All DBs
Position
1932643..1933704
Genome browser
AA seq
353 aa
AA seq
DB search
MSFLTLTSLQKSFGPVQVVKDFNMSIEKGEFISFLGPSGCGKTTVLRMIAGFETPSGGTI
TINGKSQANLRPNQRNIGMVFQAYALFPNMNVAENVAFGLKVAGRPKAEIDQRVKEMLGL
IKLDHLADRYPYQMSGGQQQRVALARALAPKPQVLLLDEPLSALDAKIRVSLREEIRMIQ
QQLGITTVFVTHDQEEALSISDRIVVMNAGRADQIGAPADIYNRPATRFVANFVGTLNLI
EAKVVDPAANRVSIGDQGVTLREPLGDVKADDTISLALRPEAGSIAPGAKGDTALSGEVV
STNFLGSVIRTRMKVGESIISFDMFNSPGLVPPVVGETVTLRFVASDLLIIRD
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcctgaccctcaccagccttcagaaatcgttcggccccgtccaggtcgtcaag
gatttcaacatgtccatcgagaagggcgagttcatctcgttcctcggtccgtccggctgc
ggcaagaccacggtgctgcgcatgatcgccggtttcgagacgccctccggcggcaccatc
accatcaacggcaagagccaggcgaacctgcgccccaaccagcgcaacatcggcatggtc
ttccaggcctatgcgctcttcccaaacatgaacgtcgccgaaaacgtcgccttcggcctc
aaggtcgccggtcgtcccaaggcggagatcgaccagcgcgtcaaggagatgctcggcctc
atcaagctcgaccacctcgccgaccgctacccctaccagatgtcgggcggccagcagcag
cgcgtggcgctcgcccgcgcgctcgcgccgaagccgcaggtcctgctgctcgacgagccg
ctgtcggccctcgacgccaagatccgcgtgtcgctgcgcgaagagatccgcatgatccag
cagcagctcggcatcaccaccgtcttcgttacgcacgaccaggaagaggcgctgtcgatc
tcagaccgcatcgtggtcatgaatgccggccgcgcagaccagatcggcgcgcccgccgat
atctacaaccgccccgccacgcgcttcgtcgccaacttcgtcggcacgctgaacctcatc
gaggcgaaggtcgtcgatcccgccgccaaccgcgtgtcgatcggcgaccagggcgtcacc
ctgcgcgagccgctcggcgacgtgaaggcggatgacacgatctcgctggcgctgcgtccc
gaggccgggtcgatcgcgccgggtgctaagggcgataccgcgctgtccggcgaggtggtc
tccaccaacttcctgggctcggtcatccgaacccgcatgaaggtcggcgaaagcatcatc
tccttcgacatgttcaacagcccgggcctcgtgcccccggtggtgggcgagacggtcacg
ctgcgtttcgtggcgagcgacctgctcatcatccgcgactag
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