Shinella oryzae: K6301_09645
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Entry
K6301_09645 CDS
T08112
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
soj
Shinella oryzae
Pathway
soj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
K6301_09645
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soj02000
]
K6301_09645
Transporters [BR:
soj02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
K6301_09645
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
Phosphonate-bd
Motif
Other DBs
NCBI-ProteinID:
UPA23459
LinkDB
All DBs
Position
1964241..1965401
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AA seq
386 aa
AA seq
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MTRLLHSCTALTLSLAFVTSAVAQEPLKALGAGEGEVSIVAWAGYIERGETDKAYDWVTD
FEKKTSCKVTVKTAATSDEMVALMNEGGFDLVTASGDASLRLVAGKRVQPINTDLIPSWK
TIDERLQNAPWHTVNGVHYGTPYLWGPNVLMYNTEAFKGEAPKSWKVVFEEMTLPDGKSN
KGRVQAYDGPIHIADAAQYLMAHKPELGIKDPYELNEDQYKAALDLLRVQRTLVGRYWHD
AMIQIDDFKNEGVVASGSWPFQVNLMKAENQPIASTFPEEGVTGWSDTTMLHAESQHPNC
AYMWMEHSLSSKVQGDAAAWFGAVPSVPAACKGNALLTDEGCATNGFDNFDKIHFWRTPV
TKCESQGECVPYHRWVSDYIGVIGGR
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgacttctgcattcctgcaccgcgcttaccctttcgctcgccttcgtcacatcc
gccgtcgcccaggagccgctgaaggcgcttggagcgggcgaaggcgaggtatcgatcgtc
gcctgggccggctatatcgagcgcggcgagacggacaaggcctatgactgggtcaccgat
ttcgaaaagaagacgagctgcaaggtgacggtgaagactgccgcgacatcggacgagatg
gtcgcgctgatgaacgaaggcggcttcgaccttgtcacggcctccggcgacgcctcgctc
cggctcgtcgccggcaagcgcgtgcagccgatcaacaccgatctcatcccgagctggaag
accatcgacgagcggctgcagaatgcgccgtggcatacggtgaacggcgtgcattacggc
accccctatctctggggcccgaacgtgctgatgtacaacacggaggccttcaagggcgag
gcgccgaagagctggaaggtcgtgttcgaggaaatgacgctgccggacggcaagtccaac
aagggccgcgtgcaggcctatgacggcccgatccacatcgccgacgccgcacagtacctg
atggcgcacaagccggaactcggcatcaaggatccctacgagctcaacgaggaccagtac
aaggcggcgctcgacctcctgcgcgtgcagcgcacgctggtcggccgctactggcacgac
gcgatgatccagatcgacgacttcaagaacgaaggcgtcgtcgcctccggttcctggccg
ttccaggtcaacctgatgaaggccgaaaaccagccgatcgcctcgaccttcccggaagag
ggcgtcacgggctggtcggacacgaccatgctgcatgccgaaagccagcacccgaactgc
gcctatatgtggatggaacactcgctgtcatcaaaggtgcagggcgacgccgccgcctgg
ttcggcgcggtgccctcggtgcccgcggcctgcaagggcaatgccctgctcaccgacgaa
ggctgcgcgaccaacggcttcgacaacttcgacaagatccacttctggcgcacgccggtg
acgaagtgcgaaagccagggcgaatgcgtgccgtatcaccgctgggtctccgactatatc
ggcgtgatcggcgggcggtga
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