Shinella oryzae: K6301_10120
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Entry
K6301_10120 CDS
T08112
Symbol
pgeF
Name
(GenBank) peptidoglycan editing factor PgeF
KO
K05810
purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:
2.4.2.1
2.4.2.28
3.5.4.4
]
Organism
soj
Shinella oryzae
Pathway
soj00230
Purine metabolism
soj00270
Cysteine and methionine metabolism
soj01100
Metabolic pathways
soj01232
Nucleotide metabolism
Module
soj_M00958
Adenine ribonucleotide degradation, AMP => Urate
soj_M00959
Guanine ribonucleotide degradation, GMP => Urate
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
K6301_10120 (pgeF)
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
K6301_10120 (pgeF)
Enzymes [BR:
soj01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.1 purine-nucleoside phosphorylase
K6301_10120 (pgeF)
2.4.2.28 S-methyl-5'-thioadenosine phosphorylase
K6301_10120 (pgeF)
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.4 adenosine deaminase
K6301_10120 (pgeF)
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GFIT
Motif
Pfam:
Cu-oxidase_4
Motif
Other DBs
NCBI-ProteinID:
UPA23547
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Position
2057528..2058319
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AA seq
263 aa
AA seq
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MKDQALPSPIQSPLIAERAGDLVRHGFFTRAGGVSEGIYRGLNVGLGSNDARENVQENRA
RVARWFGVEPDRLATVHQIHSPDVVTVDAGYDGSRPQADALVTATPGVVLGVLAADCGPI
LFCDPEARIVGAAHAGWKGALFGVLENTIAAMEALGARREAIVASLGPSIGRQNYEVGPE
FVERFLAVDPAYGRYFTPSEKPGHSMFDLPAFTTQRLNDAGVTAENLDICTYPDEDRFFS
YRRTTHRQEPDYGRQISAIMIAG
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaccaagcgcttccctccccgatccagagcccgctgatcgccgaacgcgccgga
gacctggtgcgccacggcttcttcacgcgcgccggcggcgtctcggaaggcatctatcgc
ggcctcaatgtcggcctcggctcgaacgacgcgcgagaaaacgtccaggagaatcgcgcc
cgtgtcgcccgctggttcggcgtcgaaccggaccggctcgcgacggtgcaccagatccac
tcgccggatgtcgtgaccgtcgatgccggctatgacggcagccgcccgcaagcggatgcg
ctcgtcacggccacgcccggcgtcgtgctcggcgttctcgcggccgattgcggcccgatc
ctgttctgcgatccggaggcccgcatcgtgggtgcggcgcatgcgggctggaagggcgcg
ctcttcggcgtgctggagaacaccatcgccgccatggaggcgctcggtgcacgccgtgag
gccatcgtcgccagcctcggcccctcgatcggccggcagaattacgaggtcggcccggaa
ttcgtggagcgtttcctggccgtcgatccggcttacggccgctacttcacgccttcggag
aaacccggccacagcatgttcgacctgccggccttcaccacgcagcgcctcaacgacgcc
ggcgtgacggccgaaaatctcgacatctgcacctatcccgatgaagatcgcttcttctcc
tatcggcgcaccacgcaccggcaggagcccgattacggccgccagatttcggcgatcatg
atcgcgggctga
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