Shinella oryzae: K6301_10250
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Entry
K6301_10250 CDS
T08112
Name
(GenBank) ABC transporter ATP-binding protein/permease
KO
K18893
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
soj
Shinella oryzae
Pathway
soj02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
K6301_10250
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soj02000
]
K6301_10250
Transporters [BR:
soj02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
K6301_10250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
MMR_HSR1
RsgA_GTPase
AAA_30
AAA_16
AAA_22
AAA_21
AAA_29
ATP-synt_ab
MobB
AAA_24
Septin
AAA_15
Motif
Other DBs
NCBI-ProteinID:
UPA23570
LinkDB
All DBs
Position
complement(2083567..2085423)
Genome browser
AA seq
618 aa
AA seq
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MFGWFERRLNPYPSAAPSLPPKGIIPFVWHYTRPAAPWLAVLGFCSMALGIAEVLLFQFL
GNIVDWLSAGDPGTFLAREGGTLIWMAVLLLVLIPLFGALHTMTMHQALAGNFPMIARWQ
MHRYLIRQSMTFFSNEFAGRVSTKVMQTSLAVRETVMKIIDVFIYVVSYFISMIAIIASA
DLRLVVPLLVWFVVYICILRYFVPKLMRVSREQADARSMMTGRIVDSYTNIATVKLFSHA
GREETYAREGMDEFLQTVHKQMRLITAFNIAIDVNNVIAMFFTTAIGIYFWMSGDVTVGA
VAVAAGLAMRINGMSQWVMWEVTALFENIGTVYDGMGMMTKPHDIKDAPQAPALPAAKGA
ITFDHVRFHYGKNKGAIEDLSLDIAAGEKVGLVGRSGAGKTTLMNVLLRFYDLEAGRITI
DGKDIATVTQDSLRSQIGVVTQDTSLLHRSIRDNIAYGKPEATDAEIIEAAKRANAWDFI
ESLSDHQGRSGLDAQVGERGVKLSGGQRQRIAIARVFLKDAPILVLDEATSALDSEVEAA
IQENLFALMQGKTVIAIAHRLSTLTEMDRLVVLDKGRISEMGTHAELVARGGIYADLWTR
QSGGFIADDAAETEAAAQ
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgttcggctggttcgaaagacgtttgaatccctacccctcggctgcaccctcgctgccg
cccaaggggatcatccccttcgtgtggcattatacgcgcccggccgcaccctggcttgcc
gtgctgggcttctgctccatggcgctcggcatcgccgaagtgctgctgttccagttcctc
ggcaacatcgtcgactggctttcggccggtgaccccggcacgttcctcgcccgcgagggc
ggcacgttgatctggatggccgtgcttctgctcgtgctcattccgcttttcggcgcgctg
cacacgatgaccatgcaccaggcgctcgcgggcaatttcccgatgatcgcccgctggcag
atgcatcgttatctcatccgccagagcatgaccttcttctccaacgagttcgccggccgc
gtctcgacgaaggtgatgcagacctcgcttgccgtgcgcgaaacggtgatgaagatcatc
gacgtcttcatctatgtggtgagctacttcatctcgatgatcgcgatcatcgcgtcggcg
gacctgcgtctcgtggtgccgctgctcgtgtggttcgtcgtctatatctgcatcctgcgc
tacttcgtgccgaagcttatgcgggtttcgcgcgagcaggcggatgcgcgctccatgatg
acgggccggatcgtcgacagctacacgaacatcgcgacggtgaagctgttctcgcatgcc
ggccgcgaggaaacatatgcccgcgaaggcatggacgagttcctgcagacggtgcacaag
cagatgcgcttgatcacggccttcaatatcgccatcgacgtcaacaacgtcatcgcgatg
ttcttcaccacggccatcggcatctatttctggatgtcgggcgacgtgacggtcggcgcc
gtcgcggtggcagccggccttgccatgcgcatcaacggcatgtcgcagtgggtgatgtgg
gaagtgaccgcgttgttcgagaatatcggcacggtctatgacggcatgggcatgatgacc
aagccgcacgacatcaaggatgcgccccaggcgccggcgctgccggcggcaaagggcgcc
atcaccttcgatcacgtccgcttccactacggcaagaacaagggcgcgatcgaggacctg
tcgctcgacatcgccgccggcgagaaggtcggccttgtcggccggtccggtgccggcaag
acgacgctgatgaacgtgctcctgcgcttctatgacctggaggccggccggatcacgatc
gacggcaaggacatcgccacggtcacgcaggacagcctgcgctcgcagatcggcgtggtg
acgcaggacacgtccctgctgcaccgttccatccgcgacaacatcgcctatggcaagccg
gaggcgacggatgccgagatcatcgaggcggccaagcgggccaatgcctgggacttcatc
gaaagcctgagcgaccaccagggccgcagcggcctcgatgcccaggtcggcgagcgcggc
gtaaaactctccggcggccagcgccagcgtatcgcgattgcccgcgtcttcctgaaggat
gcgccgatcctcgtgctggacgaagcgacctcggcgctcgattcggaagtcgaggcggcg
atccaggaaaacctcttcgccctcatgcagggcaagacggtgatcgcgatcgcccaccgc
ctgtcgacgctgacggagatggaccgtctcgtcgtgctcgacaagggccgcatcagcgag
atgggcacgcatgccgaactggtcgcccggggcggcatctacgccgacctctggacgcgc
caatccggcggcttcatcgccgacgacgcagccgagaccgaggcggcggcccagtaa
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