Shinella oryzae: K6301_10475
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Entry
K6301_10475 CDS
T08112
Name
(GenBank) choline ABC transporter substrate-binding protein
KO
K02002
glycine betaine/proline transport system substrate-binding protein
Organism
soj
Shinella oryzae
Pathway
soj02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
K6301_10475
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soj02000
]
K6301_10475
Transporters [BR:
soj02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
K6301_10475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OpuAC
STAS_2
Motif
Other DBs
NCBI-ProteinID:
UPA23613
LinkDB
All DBs
Position
2130848..2131807
Genome browser
AA seq
319 aa
AA seq
DB search
MNSASPFKTLLAAAVSVIALGVAGASAAEAESCGKVRFSDVGWTDITATTATATTILKNL
GYETEVTVLSVPVTYTSLSNKDIDVFLGNWMPTMEADIKPFREDGSVETVRENLEGAKYT
LATNAKGAELGIKDFADIAKHKDELGSKIYGIEPGNDGNRLIIDMVSGNKFDLSGFEVVE
SSEQGMLAEVARAEQEGTPVVFLGWEPHPMNANFKLTYLTGGDDVFGPNFGGATIYTNVR
KGYTAECPNVGKFLQNLKFSLEMENQIMGKILNDGQDPEAAATEWLKANPAAIEPWLAGV
TTKDGSGEALPAVKTALGL
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgaactctgcatcaccattcaagacactgcttgccgccgccgtctcggtcatcgcactg
ggcgtggccggcgcatccgccgccgaggccgaaagctgtggcaaggtccgcttctcggat
gtcggctggacggacatcaccgccaccaccgcgaccgccacgaccatcctcaagaacctc
ggctacgagacggaagtcaccgtgctgtccgttcccgtcacctatacctcgctgtcgaac
aaggacatcgacgtgttcctcggcaactggatgccgacgatggaagccgacatcaagccc
ttccgcgaggacggctcggtcgagaccgttcgcgaaaacctcgaaggcgccaagtacacg
ctggcgaccaatgccaagggtgcggaactcggcatcaaggatttcgccgacatcgccaag
cacaaggacgaactcggctccaagatctacggcatcgagccgggcaatgacggcaaccgc
ctgatcatcgacatggtgtcgggcaacaagttcgatctttcgggcttcgaagtggtcgag
tcctccgagcagggcatgctggccgaagtcgcccgcgccgagcaggaaggcacgccggtc
gtcttcctgggctgggagccgcacccgatgaacgccaacttcaagctgacctacctcacc
ggcggcgacgacgtcttcggccccaatttcggcggcgcgacgatctacaccaacgtgcgc
aagggctacacggccgagtgcccgaacgtcggcaagttcctgcagaacctcaagttctcg
ctagagatggaaaaccagatcatgggcaagatcctgaacgacggtcaggatccggaagcc
gcagcgaccgagtggctgaaggccaaccccgccgccatcgagccgtggctcgccggcgtc
acgacgaaggacggcagcggcgaggctctgccggcggtgaaaaccgcacttggtctctaa
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