Shinella oryzae: K6301_10480
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Entry
K6301_10480 CDS
T08112
Symbol
choW
Name
(GenBank) choline ABC transporter permease subunit
KO
K02001
glycine betaine/proline transport system permease protein
Organism
soj
Shinella oryzae
Pathway
soj02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
K6301_10480 (choW)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soj02000
]
K6301_10480 (choW)
Transporters [BR:
soj02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
K6301_10480 (choW)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
SVM_signal
DUF3464
Motif
Other DBs
NCBI-ProteinID:
UPA23614
LinkDB
All DBs
Position
2131955..2132827
Genome browser
AA seq
290 aa
AA seq
DB search
MDWLTVSKIPIGPIAKEAVSWLTTNGKGLFDFLKVFLQAGIDAVLYVLQGPFASAGGKFG
YSIALILLVSAASWYFRRSVGVALFTFLGLLLIVNQGYWKETTETLALVLAATGVSMIVG
VPLGIAAARRPWFYSILRPILDLMQTIPTFVYLIPALILFGLGMVPGLIATVIFAIPAPI
RLTRLGIISTPPALVEAAQAFGATPGQVLRKVELPFATPQIMAGLTQTIMLSLSMVVIAA
LVGAKGLGVPVVRALNTVNISMGFEAGLCIVILAIILDRLFRAADEGDGK
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
gtggattggcttaccgtttccaaaattccgatcggacccatcgccaaagaggccgtcagc
tggctgacgacgaacggcaagggactgtttgatttcctgaaagtcttcctgcaggccggc
atcgatgccgtgctctatgtgctgcagggcccgttcgccagcgccggcggcaaattcggc
tattccatcgccctcatcctgctcgtctcggccgcaagctggtatttccgccggtccgtc
ggggtggcgctcttcaccttcctcggcctgctgctcatcgtgaaccagggctactggaag
gaaaccacggaaacgctggccctcgtcctggcggcgaccggcgtcagcatgatcgtcggc
gtgccgctcggcatcgcggccgcccgccggccctggttctattccatcctgcggccgatc
ctcgatctcatgcagacgatcccgaccttcgtctacctgatcccggccctcattctcttc
gggctcggcatggtgcccggcctgatcgcgacggtgatcttcgccatccccgcgccgatc
cgcctcacccgcctcggcatcatctccacgccgcccgcgctggtcgaagcagcacaagcc
ttcggtgcgacaccgggccaggtgctgcgcaaggtcgaactgcccttcgccacgccgcag
atcatggccggcctcacccagacgatcatgctgtcgctgtcgatggtggtcatcgcggcc
ctcgtcggcgccaagggcctcggcgttcccgtggtgcgcgcgctcaacaccgtcaacatc
tccatgggtttcgaggcgggcctgtgtatcgtcatcctcgcgatcattctcgatcgcctc
ttccgcgccgctgacgaaggagacggcaaatga
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