Shinella oryzae: K6301_11170
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Entry
K6301_11170 CDS
T08112
Name
(GenBank) branched-chain amino acid ABC transporter substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
soj
Shinella oryzae
Pathway
soj02010
ABC transporters
soj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
K6301_11170
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
K6301_11170
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soj02000
]
K6301_11170
Transporters [BR:
soj02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
K6301_11170
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
ANF_receptor
Peripla_BP_5
Fe-ADH
Motif
Other DBs
NCBI-ProteinID:
UPA23745
LinkDB
All DBs
Position
complement(2274141..2275259)
Genome browser
AA seq
372 aa
AA seq
DB search
MKKSLMSAVALAAMVAFSGSAWADILVGVGGPLTGPNAAFGAQIQKGVEQAAADINAAGG
INGEQIKIVLGDDVSDPKQGVSVANKFVADGVKFVVGHFNSGVSIPTSEIYAENGILQVS
PASTNPTYTERGLWNTFRTCGRDDQQGAVAGAFIAANFKDAKLAVLHDKSPYGQGLADET
KKSANEAGVKEVIYEGVNIGDKDFSALIAKMKEAGVSVVYWGGLHTEFGLMERQAADQGL
KATFISGDGIVSNELASIAGDAVDGTLMTFAPDPRKNPAAKELVEKFRAAGFEPEAYTLY
SYAALQVIAEAAKAAGGNDAQAVAEAIKAKGPFNTAIGELSFDEKGDITRPDYVMYTWKK
GEDGKYTYFENE
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtctctcatgtcggctgttgctttggctgcaatggtcgctttcagcggcagc
gcttgggccgacatcctggtcggcgtcggcggcccgctgaccggtccgaacgccgctttc
ggcgcgcagatccagaagggcgtcgagcaggctgctgccgacatcaatgcggccggcggc
atcaacggcgagcagatcaagatcgttctgggcgatgacgtttccgacccgaagcagggc
gtttccgttgccaacaagttcgtcgccgatggcgtgaagttcgttgtcggtcacttcaac
tcgggcgtttccatcccgacgtcggaaatctacgccgaaaacggcatcctgcaggtttcg
ccggcgtccacgaacccgacctacaccgagcgcggcctgtggaacacgttccgtacctgc
ggccgtgacgaccagcagggtgcggtagccggcgccttcatcgccgccaacttcaaggat
gcgaagctcgccgttctccacgacaagagcccgtatggccagggtctcgccgacgaaacc
aagaagtcggccaacgaagccggcgtcaaggaagtcatctacgaaggcgtcaacatcggc
gacaaggacttctcggccctcatcgcgaagatgaaggaagccggcgtctccgtcgtctac
tggggcggcctgcacaccgagttcggcctgatggaacgccaggctgccgaccagggcctg
aaggctaccttcatctcgggcgacggcatcgtttcgaacgagctggcttcgatcgccggc
gacgccgtcgacggcacgctgatgaccttcgcgcccgatccgcgcaagaacccggctgcc
aaggagctcgtcgagaagttccgcgctgccggtttcgagccggaagcctacacgctctac
tcctacgccgcactgcaggtcatcgctgaagccgccaaggctgccggcggtaacgacgcg
caggccgttgccgaagcgatcaaggccaagggcccgttcaacacggcgatcggcgagctg
tccttcgacgagaagggcgacatcacccgcccggactacgtcatgtacacctggaagaag
ggtgaagacggcaagtacacctacttcgaaaacgagtaa
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