Shinella oryzae: K6301_11230
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Entry
K6301_11230 CDS
T08112
Name
(GenBank) efflux RND transporter permease subunit
KO
K21134
multidrug efflux pump
Organism
soj
Shinella oryzae
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soj02000
]
K6301_11230
Transporters [BR:
soj02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
K6301_11230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
Motif
Other DBs
NCBI-ProteinID:
UPA23754
LinkDB
All DBs
Position
complement(2288557..2291646)
Genome browser
AA seq
1029 aa
AA seq
DB search
MKKFNLSDWALDHASLVWYFMIVFALLGFFTYQNLGREEDPSFVIKTMTVSAAWPGASVE
ETTRQVTERIERKLEELESLDFTRSVTTPGQTLVFVNLKPTTRARDVAPTWQTVRNMIND
IRGEFPSGVVGPAFNDRFGDVFGNIYAFTADGLTQRQLRDYVEDARRRVLTVPNIGKVDL
IGAQDEVIYLEFSTRQLAALGISTQQVVSTLQAQNAIAPSGVVQGGGERVSVRVGGQFSS
EESLREVNLRVNNRFFRLSDIATITRGYEDPPSALFRFNGQPAIGLAIGMKQGSNLLEFG
AAVEKKIETLSEELPVGVDVHLVSDQPKVVEEAVSGFTRALFEAVAIVLIVSFVSLGLRA
GLVVALSIPLTLGITFVFMYYDGISLQRVSLGALIIALGLLVDDAMIAVEMMVARLEAGD
TLRKAATYVYTSTAFPMLTGTLVTVAGFIPIGLNNSAAGEFTFSLFVVIAISLVVSWVVA
VVFTPLLGVTILPKSMKQHHEQKGWFGRIFARILDVCMRWKWTTIVATIAVFAVSVFGMG
FVQQQFFPSSDRPELVIDWALPQNASIAETNAQIAKLEEEKLKGNPDIERWSSYVGEGAV
RFLLSFDVQPPSPAFGQTVIVTKDLEARDRVKADLDAYLRTTFVGTDALVKLLDIGPPVG
RPVQYRVSGPDIQEVRKQALAFGEILGRNDRLGDIVYDWNEPARVVKVDVLQDKARQLGV
TSQDIASALNGVVGGTTVTQIRDDTYLIDVIGRAKAGERQSIETLRQLQLPTANGTSVPL
AAVANFRYEMEQPVVWRRSRQPTITVKASVTGGVQPATIVSQMEKQVDAFRAELPSGYDI
TVGGAVEESANSQAPIVAVVPLMLFAMATILMLQLQSFSRLFLVFAVAPLALIGVVIALL
GSGAPLGFVAILGVLALIGILIRNSVILVVQIEHLRLEGKHAWDAVREATEHRMRPIMLT
AAAASLALIPISREVFWGPMAYAMMGGIIVGTVLTLLFLPALYIAWFRIKPEDKDEATPG
PEPEPATAA
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagttcaacctttcggactgggcgctcgatcatgcgtcgcttgtctggtatttc
atgatcgtcttcgcgctgctcggcttcttcacctaccagaatcttggacgggaggaggat
ccgtccttcgtcatcaagaccatgacggtcagcgccgcctggcccggcgcctccgtcgag
gaaacgacacggcaggtgacggagcgcatcgagcgcaagctggaggagctggaatcgctc
gatttcacacgcagcgtgacgacgcccggccagacgctggtcttcgtcaacctgaagccg
acgacgcgcgcccgcgacgtggcgccgacgtggcagaccgtccgcaacatgatcaacgac
atcaggggggaatttccctccggtgtggtcggtcccgccttcaatgaccgcttcggcgat
gttttcggcaatatctatgccttcaccgctgacggcctgacccagcgccagctgcgcgat
tatgtcgaggatgcccgcaggcgcgtgctgacggtgccgaatatcggcaaggtggatctc
atcggcgcgcaggacgaggtcatctatctcgaattctccacgcgccagcttgccgcgctt
ggcatttccacccagcaggtcgtctcgacgctgcaggcgcagaacgcaatcgcaccatct
ggcgtcgtgcagggcggtggggaacgtgtcagcgtgcgcgtcggcgggcagttcagctcg
gaggaaagcctgcgcgaggtcaatctgcgcgtcaacaaccgcttcttccggctgagtgac
attgccaccatcacgcggggttacgaagacccgccgtccgcactgttccggttcaacggc
cagccggcgatcggtctggcgatcggtatgaagcagggctcgaacctgctggaattcggc
gcggcggtggagaaaaaaatcgagacgctgtctgaggagctgcccgtcggcgtcgatgtg
catctcgtctccgaccagccgaaggtcgtcgaggaagcggtgtcgggcttcacgcgtgcg
ctgttcgaggcggtggccatcgtgctcatcgtcagtttcgtgagcctcggcctgcgggcg
ggcctcgtcgtggcgctctcgataccgctgacgctcggcatcaccttcgtcttcatgtat
tatgatggtatatcactccagcgcgtgtcactgggcgcactcatcatcgcgctcgggctt
ctcgtcgacgatgccatgatcgccgtggagatgatggtggcgcggctggaggcgggggat
acgctgcgcaaggcggcgacctacgtctatacatccaccgccttcccgatgctgacgggc
acgctggtgaccgtggcgggtttcatcccgatcggcctcaacaacagtgctgccggcgaa
ttcaccttctcgctgttcgtcgtcatcgcgatttcgcttgtcgtgtcatgggtcgtagcg
gtcgtgttcacaccactgctcggcgtgacgatcctgcccaagagcatgaagcagcaccac
gagcagaagggctggttcgggcgcatcttcgcccgtatcctcgatgtctgcatgcgctgg
aaatggacgacgatcgtcgcgaccatcgctgtcttcgccgtctcggtcttcggcatgggc
ttcgtgcagcaacagttcttcccgtcgtccgaccgcccggaactcgtcatcgactgggcg
ctgccgcagaacgcctcgattgccgaaacgaatgcacagatcgccaagctcgaagaggaa
aagcttaagggcaatcccgatatcgagcgctggtcttcctatgtgggcgagggcgcggtg
cgcttcctcctgtccttcgacgtgcagcccccgtcgccggccttcggccagacggtcatc
gtcaccaaggacctcgaagcgcgcgacagggtcaaggcggatctcgatgcctatctgcgc
acgacctttgttggcacggatgcgctcgtgaagctgctcgacatcggcccgccggtcggc
cgtccggtccagtaccgtgtcagcggtcccgacatccaggaagtgcgcaagcaggcgctg
gctttcggtgagattctgggccgcaacgaccggctgggcgatatcgtctacgactggaac
gagcccgcccgcgtcgtgaaggtcgatgttctccaggacaaggcccgccagctcggcgtg
acctcgcaggatatcgcctcggcgctcaacggcgtcgtcggcggcaccacggtcacgcag
attcgcgacgatacctacctgatcgacgtcatcggccgggcgaaggccggcgagcgccag
tccatcgagacgctgcgccagttgcagctgccgacggccaacggaacctccgtgccgctc
gccgccgtcgccaacttccgctacgagatggagcagccggtggtgtggcgccgctcgcgc
cagcccaccatcacggtcaaggccagcgtgaccggcggcgtgcagcctgccaccatcgtc
tcgcagatggaaaagcaggtcgatgccttccgcgccgagctgccctccggttatgacatc
accgtcggcggtgccgtcgaggaaagcgccaacagccaggcgcccatcgtcgccgtcgtg
ccgctgatgctgtttgccatggcgacgatcctgatgctgcagttgcagagcttctcacgg
ctgttcctggtcttcgcggtcgcgccgctggcgcttatcggcgtggtcatcgcgctgctc
ggcagcggagcgcctctcggcttcgtcgccattctcggcgtgctggcgctgatcggcatc
ctcatccgcaactcggtgatcctcgtggtgcagatcgagcatctgcggctggagggcaaa
catgcctgggacgcggtgcgggaggcgacggaacaccgcatgcgtccgatcatgctgacg
gcggcggccgccagcctcgcgctcattccgatctcgcgggaagtgttctgggggccgatg
gcttacgccatgatgggcggcatcatcgtcggtacggtgctgacgctgctcttcctgccg
gcgctttatatcgcctggttccgcatcaagccggaagacaaggacgaggcgacgccggga
ccggagccagaacccgctaccgccgcctga
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