Shinella oryzae: K6301_11945
Help
Entry
K6301_11945 CDS
T08112
Name
(GenBank) circularly permuted type 2 ATP-grasp protein
Organism
soj
Shinella oryzae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CP_ATPgrasp_2
CP_ATPgrasp_1
Alpha-E
Motif
Other DBs
NCBI-ProteinID:
UPA26298
LinkDB
All DBs
Position
2439846..2442158
Genome browser
AA seq
770 aa
AA seq
DB search
MVDTDGHVRPVWRHFLSALERMDETELSGRFARADRYLRDAGVFYRAYGKETITDRAWPL
SHIPVLIDEAEWEHLSRGLTQRAELLEAVVADIYGKNDLVANGLLPPALVASNNEFLRPL
VGVQPARQHFLHFVSFEIGRGPDGNWWVLSDRTQAPSGAGFALENRVATTRAFSDVYAET
HAHRLAGFFGAFRNALQAGKPAEDRIAVLTPGLANETYFEHAYIARYLGFMLLEGEDLTV
VGGKVMVRTVAGLKPVGVLWRRLDAAFADPLELNQNSHIGTPGMVEALRAGSVTFVNALG
AGIVETRAFLSFLPNICRHLLGEDQRLPSIATWWCGQEDERAHVAAHIERMIVGPAYSTR
PFFDDNEQSVLGSSLRETAKQSITEWLETDGPSLVGQEAVTLSTTPAFVDGKLVPRPMSL
RVFAARTRDGWQIMPGGFARIGAGDNVSAIAMQEGGSAADVWIVSQKPVERTSLLPAEEV
FIRNMPGSLPSRAADNLFWLGRYIERAEGALRILRAWHGRYAEYADPSQPLLKDVTDYLD
ALDIDTSEAVPTSLIRNIDSAVFSASNIRDRFSPDGWLALNDLSKTARRFHVSIEPGDDA
TRAMTVLLRKLAGFAGLVHENMYRFTGWRFLSIGRYLERGLHMTRLLGHMSGEDAPDGAL
DMLLEIGDSVMTHRRRYNVATARLTVTDLLALDPLNPRSILYQLNEIKNEVEQLPNAYAN
GQMSPFFREAMRLHAGLAVMTPETMTDAVYKRFEAELEKLSDILAQTYLS
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atggtcgacacggacggtcatgtccgcccggtctggcgccatttcctctcggcgctggag
cggatggacgagacggagctttccggtcgcttcgcccgcgccgaccgctaccttcgcgat
gccggcgtgttctaccgcgcctatggcaaggagacgatcaccgaccgtgcctggccgctc
tcccatattccggtcctcatcgatgaggccgagtgggaacacctctcgcgcggcctgacc
cagcgcgccgaactgctcgaagccgtggtggccgatatctacggcaagaacgatcttgtc
gcgaacggtctcctgccgccggctctcgtcgcatccaacaacgaattccttcgaccgctc
gtgggcgtgcagccggccagacagcatttcctgcatttcgtatccttcgagatcggtcgt
ggtcccgacggcaactggtgggtgctttcggatcgaacgcaggccccgtccggtgcaggc
ttcgcgctggaaaaccgcgtggcgacgacacgcgccttctcggacgtctatgccgaaacc
catgcgcaccggctcgccggtttcttcggcgccttccgcaacgccttgcaagcgggaaag
ccggccgaagaccgtatcgccgtcctgacacccgggcttgccaacgagacctatttcgag
cacgcctatatcgcccgctatctcggcttcatgctgctggagggggaggatctcaccgtc
gtgggcggcaaggtcatggtgcgcaccgtcgcgggcctcaaacccgtcggcgtgctgtgg
cgacgcctcgatgccgctttcgccgatccgctcgaactgaaccagaactcccatatcggc
acgcccggcatggtggaggcgttgcgcgccggttccgtcaccttcgtcaatgcgctcggc
gccggtatcgtggaaacgcgcgctttcctttctttcctgcccaatatctgtcgccatctg
ctcggcgaggatcagcgccttccctccattgccacctggtggtgcgggcaggaagacgag
cgcgcccatgtcgcagcccatatcgaacgcatgatcgtcggccccgcctattcgacccgg
ccgttcttcgatgacaacgagcagtccgtcctgggttcctcgctgcgcgaaacggcaaaa
cagtcgattacggaatggctggagaccgatggcccgagccttgtcgggcaggaagccgtc
acgctttccaccacgcccgccttcgtcgatggcaagctcgtgccgcggccgatgtcgctg
cgggtcttcgccgcccgcacccgcgacggctggcagatcatgcccggcggcttcgcccgc
atcggcgccggcgacaacgtgtcggcgatcgccatgcaggagggcggttcggccgcggat
gtctggatcgtcagccaaaaaccggtggagcgcaccagcctgctgcccgcggaagaggtg
ttcatccgcaacatgcccggcagcctgccgagccgcgcggccgacaacctcttctggctc
ggccgctatattgaacgcgccgagggcgcgctgcgcatcctgcgggcctggcatggccgc
tacgccgaatatgccgatccgtcccagccgctgctgaaggatgtcaccgattatctcgac
gcgctggatatcgacacgtcggaagccgtgccgacaagcctcatccgcaacatcgacagc
gccgtcttctccgcaagcaacatccgcgaccgcttctcgcccgatggctggctggcgctg
aacgacctgtcgaagacggcccgtcgcttccacgtcagcatcgagccgggcgatgacgcg
acgcgcgccatgacggtgcttttgcgcaagctcgcgggcttcgcgggcctcgtgcatgaa
aacatgtaccgcttcaccggctggcgcttcctgtcgatcggccgctatctcgaacgcggc
ttgcacatgacgcgccttctcggccacatgtcgggtgaggatgcgcctgacggcgcgctc
gacatgctcttggaaatcggcgacagcgtgatgacccacagacgtcgctacaacgtcgcc
acggcgcgcctcaccgtgaccgacctgctcgcgctcgacccgctcaatccgcgctcgatc
ctctaccagctcaacgagatcaagaacgaggtcgagcagctgccgaacgcctatgccaac
ggccagatgtcgccgttcttccgcgaggcgatgcgcctgcatgccggccttgccgtgatg
acgccggagacgatgacggacgctgtctacaagcgcttcgaggcggagctcgaaaagctg
tccgatattcttgcgcaaacctatctgagctga
DBGET
integrated database retrieval system
