Shinella oryzae: K6301_12200
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Entry
K6301_12200 CDS
T08112
Name
(GenBank) substrate-binding domain-containing protein
KO
K10439
ribose transport system substrate-binding protein
Organism
soj
Shinella oryzae
Pathway
soj02010
ABC transporters
soj02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
K6301_12200
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
K6301_12200
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soj02000
]
K6301_12200
Transporters [BR:
soj02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
K6301_12200
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Bmp
Peripla_BP_3
OxoGdeHyase_C
Motif
Other DBs
NCBI-ProteinID:
UPA23933
LinkDB
All DBs
Position
complement(2496727..2497680)
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AA seq
317 aa
AA seq
DB search
MRKKLLGLTVAAVAAFAGFAHAQEEKKVTIGVSIPAASHGWTAGVIYHAERVAKQLMESH
PGLNVVVKTSPDPASQANAVQDLATQGIDALVILPTDPDPLVNAIKEIKGNGTFVALVDR
APSVNDGTVRDLYVAGNNFALGEVAGQYIKETTPEAEVVVIRGMPIPIDQERQNGFDKGI
EGSGVKVLDRQYGNWNRDDAFKVMQDYLTKYQKIDVVWCQDDDMAVGVLQAIEQAGRTDI
QYVVAGAGSKDMIKKVMDGDKMIPVDVLYPPAMVGTALEMAAAHFYGQVPVRGVYTIDAT
LVTKDNAKDFYFPDSPF
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaagaaactattgggcctgacggtcgccgcggttgccgcctttgccggcttcgct
cacgcccaggaagagaagaaggtcacgatcggcgtctcgatcccggccgccagccacggc
tggacggcaggcgtgatctatcatgccgagcgtgtggccaagcagctgatggaaagccat
ccgggcctcaacgtcgtggtcaagacctcgccggacccggcaagccaggcgaatgccgtg
caggaccttgccacgcagggcatcgacgcgctcgtcatcctgccgaccgatccggatccg
ctggtcaacgccatcaaggaaatcaagggcaacggcaccttcgtcgcgcttgtcgaccgc
gcgccgagcgtcaacgacggcaccgtgcgcgacctctatgtcgccggcaacaacttcgcg
ctcggtgaagtggccggtcagtacatcaaggagacaacgccggaagccgaggtcgtcgtc
atccgcggcatgccgatcccgatcgaccaggagcgccagaacggtttcgacaagggcatc
gaaggctcgggcgtcaaggttctcgaccgccagtacggcaactggaaccgcgacgatgcc
ttcaaggtcatgcaggactacctgaccaagtaccagaagatcgacgtcgtatggtgccag
gacgacgacatggccgtcggcgttctccaggccatcgagcaggccggccgcacggacatc
cagtatgtcgtcgcgggcgccggttcgaaggacatgatcaagaaggtcatggacggcgac
aagatgatccctgtcgatgttctctatccgccggcaatggtcggtaccgcccttgagatg
gcggctgcccacttctacggccaggttccggtccgcggcgtctacacgatcgacgcgacg
ctggtgacgaaggacaacgcgaaggacttctacttcccggactcgccgttctga
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