Shinella oryzae: K6301_12250
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Entry
K6301_12250 CDS
T08112
Name
(GenBank) HlyD family secretion protein
KO
K03543
membrane fusion protein, multidrug efflux system
Organism
soj
Shinella oryzae
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soj02000
]
K6301_12250
Transporters [BR:
soj02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
K6301_12250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_3
Biotin_lipoyl_2
HlyD_D23
Biotin_lipoyl
CusB_dom_1
OEP
DUF6480
AgI_II_C2
MAD
Ketoacyl-synt_C
Motif
Other DBs
NCBI-ProteinID:
UPA23943
LinkDB
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Position
complement(2510212..2511414)
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AA seq
400 aa
AA seq
DB search
MSTSHGAGTAKVRPVNDDFEAETGEAPPAAAEVSASAEAAREPEKKKGGRRLLLPVVALA
VLAGAGWFGYEWWTNGRFMISTDDAYIEGDIASISPKVSGYVAAVNVVANQTVKAGDPLV
TLDDGDYRIAREQADAQIATQKLALNRIDAQIEGAKASLAQAEAQKTAYQAALEGAQVAE
TRAKELNAKAVGTTASLDSATVALDQAKANLVGADANIVSAKANIAVLQAQRAEAESTVR
SLQLASDKAARDLGFTVLKAPYDGVVGNVSVQVGDLVSAGQRLAALVPVTQLYVEANFKE
TQIAHLVPGSKVHLHVDAFDKDDIVGTVTSIAPASGSVFSLLPAENATGNFTKVTQRVPV
RIAIPQDALDTGKLRAGLSVVVDVDSRTAPTDTAAVAKAE
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacttcccatggtgccggcacggcaaaggtccgtccagtcaacgatgatttcgag
gcggagaccggcgaggccccgccggccgccgctgaagtgtccgcgtccgcggaagctgcg
cgcgagcccgagaaaaagaagggcgggcgccgtctgctgctgcctgttgtcgcgctcgcc
gtgctggccggcgctggctggttcggctatgagtggtggaccaacggccgcttcatgatt
tcgaccgatgacgcctatatcgagggcgacatcgcctccatctcgccgaaggtctccggc
tatgtggcggctgtgaatgtcgtggcgaaccagacggtgaaggccggcgacccgctcgtc
acgctcgatgacggcgactaccgcatcgcccgcgagcaggcggacgcccagattgcgacc
cagaagctcgcgctcaaccgcatcgatgcgcagatcgaaggcgccaaggccagccttgcc
caggcggaagcgcagaagaccgcttaccaagccgccctcgaaggtgcgcaggtcgccgag
acgcgcgcgaaggagctgaatgcgaaggccgtcggcacgaccgcctcgctggacagcgcc
accgtcgcgctcgaccaggccaaggcgaacctcgtcggtgcggatgccaacattgtctcg
gccaaggccaatatcgccgtcttgcaggcgcagcgcgccgaggcggaaagcacggtccgg
tcgctgcagctggcaagcgacaaggcagcgcgcgacctcggtttcactgtgctgaaggcg
ccctatgacggcgtcgtcggcaatgtttcggtacaggtcggcgatctcgtctcggccggg
cagaggcttgccgcgctggttccggtcacgcagctttacgtcgaggccaacttcaaggaa
acgcagatcgcgcatctcgtgccgggctcgaaggtccacctgcatgtcgatgccttcgac
aaggacgatatcgtcggtacggtcacgtcgattgcgccggcatccggttcggtcttctcg
ctgctgccggctgaaaacgccacgggcaacttcaccaaggtcacgcagcgcgtgccggtc
cgcatcgccataccgcaggatgccctcgatacgggcaagctgagggccgggctcagcgtc
gtcgtggatgtcgacagccgaaccgcgccgacggacacggcggcagtggcgaaagccgaa
tag
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