KEGG   Shinella oryzae: K6301_12250
Entry
K6301_12250       CDS       T08112                                 
Name
(GenBank) HlyD family secretion protein
  KO
K03543  membrane fusion protein, multidrug efflux system
Organism
soj  Shinella oryzae
Brite
KEGG Orthology (KO) [BR:soj00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:soj02000]
    K6301_12250
Transporters [BR:soj02000]
 Other transporters
  Accessory factors involved in transport [TC:8]
   K6301_12250
SSDB
Motif
Pfam: BSH_RND BSH_CusB Biotin_lipoyl Beta-barrel_AAEA Beta-barrel_RND_2 BSH_YknX Beta-barrel_AprE Beta-barrel_ALG44 BSH_LcnD Beta-barrel_YknX BSH_CzcB DUF6480 AgI_II_C2 GtrB_C BSH_Fcp1 MAD DivIC
Other DBs
NCBI-ProteinID: UPA23943
LinkDB
Position
complement(2510212..2511414)
AA seq 400 aa
MSTSHGAGTAKVRPVNDDFEAETGEAPPAAAEVSASAEAAREPEKKKGGRRLLLPVVALA
VLAGAGWFGYEWWTNGRFMISTDDAYIEGDIASISPKVSGYVAAVNVVANQTVKAGDPLV
TLDDGDYRIAREQADAQIATQKLALNRIDAQIEGAKASLAQAEAQKTAYQAALEGAQVAE
TRAKELNAKAVGTTASLDSATVALDQAKANLVGADANIVSAKANIAVLQAQRAEAESTVR
SLQLASDKAARDLGFTVLKAPYDGVVGNVSVQVGDLVSAGQRLAALVPVTQLYVEANFKE
TQIAHLVPGSKVHLHVDAFDKDDIVGTVTSIAPASGSVFSLLPAENATGNFTKVTQRVPV
RIAIPQDALDTGKLRAGLSVVVDVDSRTAPTDTAAVAKAE
NT seq 1203 nt   +upstreamnt  +downstreamnt
atgtcgacttcccatggtgccggcacggcaaaggtccgtccagtcaacgatgatttcgag
gcggagaccggcgaggccccgccggccgccgctgaagtgtccgcgtccgcggaagctgcg
cgcgagcccgagaaaaagaagggcgggcgccgtctgctgctgcctgttgtcgcgctcgcc
gtgctggccggcgctggctggttcggctatgagtggtggaccaacggccgcttcatgatt
tcgaccgatgacgcctatatcgagggcgacatcgcctccatctcgccgaaggtctccggc
tatgtggcggctgtgaatgtcgtggcgaaccagacggtgaaggccggcgacccgctcgtc
acgctcgatgacggcgactaccgcatcgcccgcgagcaggcggacgcccagattgcgacc
cagaagctcgcgctcaaccgcatcgatgcgcagatcgaaggcgccaaggccagccttgcc
caggcggaagcgcagaagaccgcttaccaagccgccctcgaaggtgcgcaggtcgccgag
acgcgcgcgaaggagctgaatgcgaaggccgtcggcacgaccgcctcgctggacagcgcc
accgtcgcgctcgaccaggccaaggcgaacctcgtcggtgcggatgccaacattgtctcg
gccaaggccaatatcgccgtcttgcaggcgcagcgcgccgaggcggaaagcacggtccgg
tcgctgcagctggcaagcgacaaggcagcgcgcgacctcggtttcactgtgctgaaggcg
ccctatgacggcgtcgtcggcaatgtttcggtacaggtcggcgatctcgtctcggccggg
cagaggcttgccgcgctggttccggtcacgcagctttacgtcgaggccaacttcaaggaa
acgcagatcgcgcatctcgtgccgggctcgaaggtccacctgcatgtcgatgccttcgac
aaggacgatatcgtcggtacggtcacgtcgattgcgccggcatccggttcggtcttctcg
ctgctgccggctgaaaacgccacgggcaacttcaccaaggtcacgcagcgcgtgccggtc
cgcatcgccataccgcaggatgccctcgatacgggcaagctgagggccgggctcagcgtc
gtcgtggatgtcgacagccgaaccgcgccgacggacacggcggcagtggcgaaagccgaa
tag

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