Shinella oryzae: K6301_12275
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Entry
K6301_12275 CDS
T08112
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
soj
Shinella oryzae
Pathway
soj00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
K6301_12275 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
soj01007
]
K6301_12275 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
soj03016
]
K6301_12275 (lysS)
Enzymes [BR:
soj01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
K6301_12275 (lysS)
Amino acid related enzymes [BR:
soj01007
]
Aminoacyl-tRNA synthetase
Class II (A)
K6301_12275 (lysS)
Transfer RNA biogenesis [BR:
soj03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
K6301_12275 (lysS)
Prokaryotic type
Other AARSs
K6301_12275 (lysS)
BRITE hierarchy
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Paralog
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GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
UPA23948
LinkDB
All DBs
Position
2516967..2518463
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AA seq
498 aa
AA seq
DB search
MTDTKTETALSSDPTEVRRQKLEQLRKTIGDVYPAHFHRTMTNAELADKYETLEPDTESG
DVVTVAGRVYSSRNSGMFMDIHDASGKIQIFSHKDTTPQEARDLLPMIDIGDIIGVTGTV
RRTKRGELTINAQEIVMLTKTLLPMPEKWHGVSDVEIRYRKRHLDIMTNEESKLRFQQRS
KIVSGIRRFMENDGFMEVETPMLHSVYGGATAEPFKTHHNTLKLDMYLRIAPELFLKRTL
VSGLTDKVFEINRNFRNEGVSTRHNPEFTMMECYWAYADYEDVMDLVERLFAELAVKIHG
STEFAYGDKELSFKGPFKRVPMPDAVKEATGIDFLAIKTDEEARAAAKAAGFEVEKDWTW
GECLAFIFEEKVEGTLIQPSHVTHFPKDISPFAKEVPGEPRLVERFETYCNAWELGNAFS
ELNDPEEQRARMVEQLNQAHARGEKDKQLDDEFLDAIDQGMPPAGGLGIGVDRLIMLLTN
APSIRDVILFPARRAKAD
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacacgaagacagaaaccgccctttcctccgatccgacggaagtccgccgccag
aagctcgagcagctgcgcaagacgatcggcgatgtctatccggcgcattttcatcgcacg
atgaccaatgcggaactggccgacaaatacgagacgctggaacccgatacggaaagcggc
gacgtcgtgacggtcgccggccgcgtctattcctcgcgcaattccggcatgttcatggac
atccatgacgcctcgggcaagatccagatcttcagccacaaggatacgacgccgcaggag
gcccgcgacctgctgccgatgatcgatatcggcgacatcatcggcgtgaccggcaccgtg
cgccgcaccaagcgcggcgagctgacgatcaacgcgcaagagatcgtcatgctgacgaag
acgctgctgccgatgcccgagaagtggcacggcgtttcggatgtcgagatccgctaccgc
aagcgccatctcgatatcatgaccaacgaggaatcgaagctgcgcttccagcagcgctcg
aagatcgtctcaggcatccgccgcttcatggaaaacgacggcttcatggaagtcgagacg
ccgatgctgcactcggtgtacggcggcgcgacggccgagcccttcaagacgcaccacaac
acgctgaagctcgacatgtacctgcgcatcgcgccggaattgttcctgaagcgcacgctg
gtctccggcctcaccgacaaggtgttcgagatcaatcgcaacttccgcaatgagggtgtg
tcgacgaggcacaatcccgaattcacgatgatggagtgctactgggcctatgccgactac
gaggacgtgatggacctcgtggaacgcctcttcgccgagctggccgtcaagatccacggc
tcgaccgaattcgcctatggcgacaaggagctctccttcaagggcccgttcaagcgtgtg
ccgatgcccgatgccgtcaaggaagccaccggtatcgacttccttgccatcaagacggac
gaggaagcccgcgccgccgccaaggcggccggcttcgaagttgaaaaggactggacctgg
ggcgagtgccttgccttcatcttcgaggagaaggtcgagggcacgctgatccagccgagc
catgtcacccatttcccgaaagacatctcgcccttcgccaaggaagtaccgggcgagccg
cgcctcgtcgagcggttcgagacctattgcaatgcctgggaactcggcaatgccttctcc
gaactgaacgacccggaagagcagcgcgcccgcatggtcgagcagctcaaccaggcccat
gcccgcggcgagaaggacaagcagctcgacgacgagttcctggatgcgatcgaccagggc
atgccgcccgccggcggcctcggtatcggcgtggaccgcctgatcatgttgctcaccaac
gccccgtcgatccgcgacgtcatcctctttccggcgcgccgcgcaaaggcggactga
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