Shinella oryzae: K6301_12650
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Entry
K6301_12650 CDS
T08112
Symbol
glgX
Name
(GenBank) glycogen debranching protein GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
soj
Shinella oryzae
Pathway
soj00500
Starch and sucrose metabolism
soj01100
Metabolic pathways
soj01110
Biosynthesis of secondary metabolites
Module
soj_M00565
Trehalose biosynthesis, D-glucose 1P => trehalose
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
K6301_12650 (glgX)
Enzymes [BR:
soj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
K6301_12650 (glgX)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
ISOA1-3_C
hDGE_amylase
Motif
Other DBs
NCBI-ProteinID:
UPA24008
LinkDB
All DBs
Position
complement(2589598..2591679)
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AA seq
693 aa
AA seq
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MSYSFSELDFMKPELGAAFTGEGTHFAVFSAHAEQVELCLFSDDGKEETARLALPKREGD
VWSGYIAGLRPGTVYGYRAHGPYDPKAGHRFNPNKLLLDPYAQQVMGELQWDDALYGYKV
GDPQEDLSFDDRDSAPFMVKGVVQDLEFDWAGDSAIRRPWTETIIYETHVRGLTMTHPGV
PDELRGTFLGMASDPVIEHLVDLGISAIELLPIQYFPDDRFLLEKGLRNYWGYQTLGFFA
PQPRFLSAGAVTEFKTMVKRFHAAGIEVIMDVVYNHTAEGSERGPTLSFRGLDNLSYYRL
SPDDPRHSYDTTGTGNTVNIAHPMVLRMVLDSLRYWVGVMHVDGFRFDLASTLGRTRHIE
FDREGTFFDAIRQDPILSGVKLIAEPWDVGDGGYQVGGFPHPFREWNDKYRDDVRRFWKG
DGGLVPGVAARLTGSAQQFNHSDRGATTSVNLLSAHDGFTLMDTVSYDDKHNDANGEENR
DGHSDNHSHNMGAEGPTDDQGIRDARDRRRRNMIATLMLSQGVPMLLGGDELGNSQGGNN
NAYCQDNEIGWTDWSGVDDPFLAFCKGAIAFRKAHPVLRQERFLTGEPGEDGTVEIGWYR
PDGAAMDDAAWQDGELRTLGLFLCKSVDDERADQLFLVFNAGGDCEVTLPDVNGIQAWKR
VLDTGAAEEGFAEHPAESPAIVYGASVVAFEPA
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgagttattcgttttccgagctcgatttcatgaaaccggagctcggggccgcctttacg
ggcgagggcacacatttcgcggtgttctccgcccatgcggaacaggtcgagctttgcctt
ttcagcgatgatgggaaggaggagaccgcgcgtctggcactgccgaagcgtgagggtgat
gtgtggtccggttatattgcggggcttcggcccggcacggtctacggttaccgggcccac
gggccctatgatccgaaggccgggcatcgttttaaccccaacaagctgctgctcgatccc
tatgcccagcaggtgatgggagaactccagtgggacgatgccctctacggctacaaggtc
ggcgatccccaggaggatctgtccttcgatgaccgcgacagcgcgcccttcatggtcaag
ggcgtggtgcaggatctggaattcgactgggccggggattccgccattcgccggccatgg
accgagaccatcatctacgaaacgcatgtgcgcgggctgacgatgacccatccgggtgtt
ccggacgagctgcgcggcaccttcctcggcatggcgagcgatcccgtcatcgagcatctc
gtcgacctcggcatttctgcaatcgagctgctgccgatacagtatttccccgatgaccgg
ttcctcctggaaaaaggcctgcgcaattattggggctaccagacgctcgggttcttcgcc
ccgcagccgcgcttcctttcggcaggtgcggtcaccgaattcaagaccatggtgaaacgc
ttccatgcagccggcatcgaggtgatcatggacgtggtctacaaccacacggccgagggt
tccgagcgggggccgaccctgagcttccgcggcctcgacaatctcagctactatcgtctc
tcgcccgacgatccgcgtcactcctacgatacgacgggcacgggcaatacggtcaacatc
gcgcatcccatggtgctgcgcatggtgctggacagcctgcgctactgggtcggcgtgatg
catgtcgacggtttccggttcgacctcgccagcacgctcggccgtacacggcacatcgaa
ttcgaccgcgaagggaccttcttcgatgcaatccggcaggatccgatcctgtcaggcgtg
aaactgatcgcggaaccctgggatgtcggtgacggcggctatcaggttggcggctttccc
catccgttccgcgaatggaacgacaagtaccgcgacgacgtccgccgcttctggaagggc
gacggcggactggtgccaggcgtcgccgcacgccttaccggatctgcgcagcagttcaat
cattccgaccgcggtgcaacgacgtcagtcaatcttctcagcgctcatgacggtttcacc
cttatggacacggtttcctatgacgacaagcacaatgatgccaatggcgaggaaaaccgc
gacggccattccgacaatcactcgcacaatatgggcgcggaaggccctacggacgatcag
ggtatccgggacgcacgcgatcgccgccggcgcaacatgatcgcgacgctgatgctcagc
cagggcgtgccgatgctgcttggcggtgatgaactcggcaacagccagggcggcaacaac
aacgcctattgccaggacaacgaaatcggctggaccgactggagcggcgtggacgatccc
tttctcgcattctgcaagggcgcgatcgccttccgcaaggctcatcccgtcctgcggcag
gagcggttcctgaccggtgaacccggcgaagatggtaccgtcgagatcggctggtaccgt
ccggacggggcggccatggacgacgccgcatggcaggatggtgagctgcgcacgctcggg
ctcttcctttgcaagtctgtcgacgatgagcgcgccgaccagctcttcctggtcttcaat
gcgggtggagactgcgaggtcaccctgcctgatgtgaacgggattcaggcgtggaagcgt
gtgctggacaccggagcggcggaggaaggctttgctgagcatcccgccgaaagccccgcc
atagtctatggcgccagcgtcgtcgccttcgaacctgcctga
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