Shinella oryzae: K6301_12735
Help
Entry
K6301_12735 CDS
T08112
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K02624
IclR family transcriptional regulator, pca regulon regulatory protein
Organism
soj
Shinella oryzae
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
soj03000
]
K6301_12735
Transcription factors [BR:
soj03000
]
Prokaryotic type
Helix-turn-helix
IclR family
K6301_12735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR
HTH_IclR
HTH_24
UPF0175
Motif
Other DBs
NCBI-ProteinID:
UPA24024
LinkDB
All DBs
Position
complement(2609205..2609966)
Genome browser
AA seq
253 aa
AA seq
DB search
MTVKERDMMGGLAKGLKVIEAFSAERPRLSIAEAADIAGLDRATTRRCLLTLSELGYAAY
DGKFFTVTPRILRLGTGCLATMPLPRIVQPTLDRLSEEIGQSTSVSILDEWEIVYVARAA
QQRVMSIALMPGSRLPAYCTSMGRVLLAARAEDEARALLEASPRVARTERTVTEMSALMA
ALEDVRRLGFATIDQEVETGLRSIAVPLRTSRGKTIAALNVGLAATAEPMAAIVERYLPA
LLKRQAELASMLA
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgacggtgaaggaacgggacatgatgggcggcctcgccaaggggctgaaggtgatcgag
gccttcagcgccgagcgcccgcgcctttccattgccgaagcggccgacatcgccgggctc
gaccgtgccaccacgcggcgctgtctgctgacgctttccgaactcggctatgcggcctat
gacggcaagttcttcaccgtcaccccgcgtatcctgcgcctcggcacgggctgtcttgcc
acaatgccgctgccgcgcatcgtccagccgacgctcgaccgtctgtcggaggagatcggc
cagagcacgtcggtatcgatcctcgacgaatgggaaatcgtctatgtggcccgcgccgcc
cagcagcgggtgatgtccatcgcgctgatgccgggttcgaggctgccggcctattgcacc
tcgatgggacgcgtgctgctcgccgcgcgcgctgaggatgaggcgcgggcgctgctggag
gcgtccccgcgcgtggcccgcaccgagcgcacggtaacggagatgtccgcgctgatggcg
gcgctggaggatgtgcgccggctcggcttcgcgaccatcgatcaggaggtggaaaccggc
ctgcgctccatcgccgtgccgttgcgcacgtcgcgcggcaaaacgatcgccgcgctgaat
gtcgggcttgccgcgaccgcggaaccgatggcggccatcgtcgagcgctatctaccggcg
ctcttgaagcggcaggccgaactcgcgtcgatgctggcctga
DBGET
integrated database retrieval system
