Shinella oryzae: K6301_12835
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Entry
K6301_12835 CDS
T08112
Name
(GenBank) ABC transporter substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
soj
Shinella oryzae
Pathway
soj02010
ABC transporters
soj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
K6301_12835
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
K6301_12835
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soj02000
]
K6301_12835
Transporters [BR:
soj02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
K6301_12835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
ANF_receptor
Peripla_BP_5
Big_11
Motif
Other DBs
NCBI-ProteinID:
UPA24040
LinkDB
All DBs
Position
2629515..2630642
Genome browser
AA seq
375 aa
AA seq
DB search
MIKKLLSATAMVLALGAAPALADLKVGSIVELSGPGAAAGTNFRDGVKMGFEEINAQGGI
LKEPVSVIEYDSQTDPQVSRAMVQKAIDDEVYAIMGTVFSSSTVVNMIVAKQYGIPQFTG
SEAPSITAKGNPYIFRTAFGSQKGVPKMVKYMVEKMGVKKVGVAWANTEFGKGGHQAFID
EAAKAGLEIVVDVPSEQAQADFSADVLKLKNSGADAFFVYYTEEESARFLREARKQGIEK
PLIGETTLIGHKVIELAGDAANGAMGHVGLTPDADVPALKDMVERFKTKFKYTPDHNAIK
GYTAAWTLKYVTEMVGSPDSKAIAEKMHGLTLKAAEYPGVLLDVSWDETGEMSRESFFVK
VENGKQVVEAILPAN
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagaaactgctttccgcaacggcaatggtgctggcgcttggtgctgcacccgcg
ctcgcagatctcaaggtcggctcgatcgtcgagctgtccggccccggcgccgccgccggc
acgaatttccgcgatggcgtgaaaatgggcttcgaggagatcaatgcccagggcggcatc
ctcaaggagccggtcagcgtcatcgaatatgacagccagaccgatccgcaggtttcccgc
gccatggtccagaaggcgatcgatgacgaagtctacgccatcatgggcaccgtcttctcg
tcttcgaccgtcgtgaacatgatcgtcgccaagcagtatggcattccgcagttcaccggt
tccgaggcgccctccatcaccgccaagggcaatccctacatcttccgcaccgccttcggc
tcccagaagggcgtgccgaagatggtgaagtacatggtcgagaaaatgggtgtgaagaag
gtcggcgtcgcctgggccaacaccgagttcggcaagggcggccatcaggccttcatcgac
gaagcggccaaggccggcctcgagatcgtcgtggacgttccctccgaacaggcccaggcc
gatttctccgccgacgtgctgaagctgaagaattccggtgccgatgccttcttcgtctac
tacaccgaggaagaaagcgcgcgcttcctgcgcgaggcccgcaagcagggtatcgaaaag
ccgctgatcggcgaaaccaccctgatcggccacaaggtgatcgagcttgccggcgatgcc
gcgaacggcgccatgggccatgtcggcctgacgccggacgccgatgtcccggccctgaag
gacatggtcgagcgcttcaagaccaagttcaagtacacgccggaccataatgccatcaag
ggctacaccgccgcctggacgctgaaatacgtcaccgaaatggtcggatcgccggacagc
aaggccattgccgaaaaaatgcatggcctcaccctcaaagctgccgaatatcctggcgtc
ctcctggatgtgagctgggacgaaacgggtgaaatgtcgcgcgagagcttcttcgtgaag
gtcgagaacggcaagcaggtcgtcgaggccatcctgcccgcgaactga
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