Shinella oryzae: K6301_12850
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Entry
K6301_12850 CDS
T08112
Name
(GenBank) ABC transporter ATP-binding protein
KO
K01995
branched-chain amino acid transport system ATP-binding protein
Organism
soj
Shinella oryzae
Pathway
soj02010
ABC transporters
soj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
K6301_12850
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
K6301_12850
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soj02000
]
K6301_12850
Transporters [BR:
soj02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
K6301_12850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
BCA_ABC_TP_C
AAA_21
AAA_29
AAA_23
SMC_N
AAA_22
AAA_16
MMR_HSR1
RsgA_GTPase
NB-ARC
DUF5906
T2SSE
Motif
Other DBs
NCBI-ProteinID:
UPA26317
LinkDB
All DBs
Position
2632589..2633350
Genome browser
AA seq
253 aa
AA seq
DB search
MHTRQHDGPILSVRNISKQFGGIRAVNGVSFDVQRGEILGLIGPNGSGKSTLFNCILGQL
RPTEGHCEIEGRSTDGVRPADLSLMGVGRTFQQLSVFPKMSVLDNVILAGQEHEGSMLSR
LFGKSDAGLTEKAEQLIEFFRLTPYRDTAAGSLSYGQQKLVDAAMAFMAGPGIVLLDEPA
GGVNLTMLGHLKERLITYNREHGTTFVVIEHNMEFVMSLCTRIIVLAQGEIIAEGSPDEI
RSNQMVIDAYLGG
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgcacaccaggcaacacgacggccccattctttcggtccgcaatatttccaagcagttc
ggcggcatccgcgcggtcaacggcgtgagtttcgatgtccaacgcggcgagatcctcggc
ctgatcggccccaacggctccggcaagtcgacgctgttcaactgcatccttggccagctg
cgcccaacggaaggccattgcgagatcgaaggtcggtcgaccgacggcgtgcgccccgca
gacctttccctgatgggcgtcggacgcaccttccagcagctttcggtcttcccgaaaatg
tcggtgctcgacaatgtcatccttgccgggcaggaacacgagggctcgatgctctcgcgc
ctcttcggcaaatccgatgcggggctcacggaaaaagccgagcagctgatcgagttcttc
cgcctgacgccctaccgcgatacggcggcgggatcgctctcctacggccaacagaagctc
gtcgacgccgccatggccttcatggccggccccggcatcgtccttctcgacgagccggcc
ggcggcgtgaacctcaccatgctcggccacctcaaggaacggctgatcacctataaccgc
gaacacggcacgaccttcgtcgtcatcgaacacaacatggagttcgtgatgtcgctgtgc
acgcgcatcatcgtgctggcgcagggcgagatcatcgccgaggggagcccggacgagatc
cggtcgaaccagatggtcatcgacgcttatctcggaggctga
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