Shinella oryzae: K6301_13080
Help
Entry
K6301_13080 CDS
T08112
Name
(GenBank) PAS domain-containing methyl-accepting chemotaxis protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
soj
Shinella oryzae
Pathway
soj02020
Two-component system
soj02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
K6301_13080
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
K6301_13080
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
soj02035
]
K6301_13080
Bacterial motility proteins [BR:
soj02035
]
Flagellar system
Chemotaxis proteins
MCPs
K6301_13080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
PAS_3
PAS_9
PAS_4
PAS
PAS_8
Laminin_II
COG6_N
DUF948
TraC_F_IV
Motif
Other DBs
NCBI-ProteinID:
UPA24076
LinkDB
All DBs
Position
complement(2684490..2686256)
Genome browser
AA seq
588 aa
AA seq
DB search
MISFTRFTDSSHIIDALSRSQAVIQFDLAGNVLTANENFCTALGYDLAEIVGQHHRMFCD
AAHTASDDYRQFWMRLGRGEYDSGSYKRLRKDGSEIWIQASYNPVFRGGKPYKVVKFATD
ITLAKIRAAEDASKLDAISRSQAVIEFTPTGEILHANENFCAGLGYDLAEIVGKHHRMFC
DPAYAQTPAYADFWKSLAAGNFISSEFVRYGKGGKEIWIQAAYNPIRDLNGRVYKVVKFA
TDVTERMSAINALGGALKALAEGDLTQHLAMPFVPSMEKVRSDFNAAVAGLHAAMRTVET
NANAIASGAQQIRSAADDLARRTERQAASVEETAAALDQITTTVSDSSRRADEAGSLVGQ
TRAGAEKSGEVVKRAIDAMGQIEQSSREISSIIGVIDDIAFQTNLLALNAGVEAARAGEA
GKGFAVVAQEVRELAQRSASAAKDIKALITTSGEQVKNGVSLVDETGRTLREILAQVLEV
HTNVVAIVEASREQSTGLREINQAVNAMDQATQQNAAMVEESTAASHAMAREADALHGLI
RRFRLAETVSQAQRTSLPAPVAQLHAVARTMRASQSSAVQAAADWEEF
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgatttctttcacaaggtttacggattcgagccatatcatcgacgccctgtcgcgttcg
caggccgtgatacagttcgatctcgccggcaatgttctgactgccaacgaaaacttctgc
acggcgctcggctacgatctggcagagatcgtcggtcagcatcaccggatgttctgcgac
gccgcgcatacggccagcgacgactaccggcagttctggatgcgccttgggcgtggagag
tatgattccggcagctacaagcgtctgcgcaaggacggcagcgagatctggatccaggcg
tcgtacaatccggtctttcggggcggcaagccctacaaggtggtcaagttcgcgacggat
atcacgcttgcaaaaatccgtgctgcggaggacgcgagcaagctcgatgcgatctcgcgc
tcccaggcggtcatcgaattcacgcccaccggcgaaatcctgcatgccaacgagaacttc
tgtgccgggctgggttatgatctggcggagatcgtcgggaaacaccatcgcatgttctgc
gaccccgcctatgcgcagacgcctgcctatgccgatttttggaagagcctcgcggcggga
aatttcatctccagcgagttcgtgcgttacggcaagggcggcaaggagatctggatccag
gcggcctataacccgatccgggatctgaacggccgggtctacaaggtcgtcaagttcgca
accgacgtcacggagcgcatgtcggcgatcaatgcgcttggcggcgcgctcaaggcgctc
gcggaaggcgaccttacgcagcatctcgccatgcccttcgttccctcgatggaaaaggtg
cgcagcgacttcaacgcggccgttgccggtcttcatgcggcaatgcggacggttgaaacc
aatgcgaacgccatcgcctcgggcgcgcagcagatccgttcggcagcggacgacctggcc
aggcgcacggaacgacaggcggcttccgtcgaggaaaccgctgccgcgctcgaccagatc
acgacgacggtcagcgattcgagccggcgggccgatgaagccggcagcctggtcgggcag
acccgggcgggtgccgaaaaatccggcgaggtcgtcaagcgcgcgatcgacgccatgggc
cagatcgagcagtcctcgcgcgagatttccagcatcatcggcgtcatcgacgatatcgcc
ttccagaccaacctgctggcgctcaatgccggggtggaggcggcgcgggcaggcgaggcc
ggcaagggctttgccgtcgtcgcacaggaagtgcgtgagctcgcgcagcgttcggccagt
gccgcaaaggacatcaaggcactgatcacgacgtcgggcgagcaggtgaagaacggtgtg
tcactcgtcgacgagacggggcggaccctgcgcgagatcctggcacaggtgctcgaggtc
cacacgaatgtcgttgccatcgtggaagcatcgcgcgagcagtcgacggggcttcgcgag
atcaatcaggccgtcaacgcgatggaccaggcgacgcagcagaacgcggcgatggtggag
gagagcacggccgccagccacgccatggcgcgtgaggcggatgcgcttcatggcctcatc
cgccgcttccgcctggcggaaaccgtaagccaggcgcaacgcacgtcattgccggcgcct
gtcgctcagcttcatgccgtggcgcgcacgatgcgggcatcacagagctcggcggttcag
gcggccgccgattgggaagagttctga
DBGET
integrated database retrieval system
