Shinella oryzae: K6301_13105
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Entry
K6301_13105 CDS
T08112
Name
(GenBank) translocation/assembly module TamB
KO
K09800
translocation and assembly module TamB
Organism
soj
Shinella oryzae
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soj02000
]
K6301_13105
Transporters [BR:
soj02000
]
Other transporters
Pores ion channels [TC:
1
]
K6301_13105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
UPA24081
LinkDB
All DBs
Position
complement(2689991..2694160)
Genome browser
AA seq
1389 aa
AA seq
DB search
MTRLSRILRAILRYAGYGLAVLLVILVAVLGFVGFTDAGARMAVSYVEKLAAASGQVISI
SEPSGLLTGRLRVGSVTLGDDKGTYAEIRDLAVDWSPLELLFFSFDASRVSASSISLLRL
PESKADAQPSDTPFKLPVEVHVDSLAIPELFVSGSVAGRDQRIVVSGRGDATAESVAIKL
SANEVERPDARLAADIVFNPAENVLRLETDVAEPKGGLLANLLKLPNEPAVSIRLTGDGP
LSQWKGRLSAALDGTEMLRVDGRHDLSANGLHTLSVKGGGTFDALMPPQLRPLFAGETNI
DLVAAFDGSDMVRIEKGNIATGAMTLAASGAVSATGSNDFNVKLDGRDGPIDFRWPLAGG
DARILIDGADISLTGAANAAALRADVAVVSAALPAGRVENIRLSARSDAFNVSSQSGRVD
VTVETGDMAFANADIDRMVKGPAKVVATLNVSPTEIAFDPATLESASIGGTLSGRYGLES
READVNFRLFALPAVLPPALSGKFDTTIAMEGRVQLAGNGALQLTGLQLKSGTAEAAGDV
ALAEGNLDATLAGKVLNLGKLLGDASGEAAFDVSAKGPVDGLDVAAKVTSSGATLSGRTL
SDLVVTLNGKAVADRPSGELTATGALDGQAINVRSSITSEGRRISVPVLEAEIGANTLKG
SLALTPDFMPDGTVRFNFPDLGLLAAMAGQKAAGDLSGQVEIATTNGRTSAIVQASGSGI
SRDAISISKPTVDLTITDLATLAINGTVRAERIVSGGNRVDALSLDFSREGQATRFDLGG
RLDNAPLVAKGQVVQRAGGLDVALQTFEGAPRGIALKLASPSTIAVDNGVAVLDKLTIQA
GTGSVAVSGRAGETLDLSLGLNAVPAALINNFAPGLGAEGAIGGTVTVKGRAAAPVVNYA
LDWKGAVTSQTRGAGIGAVDINAKGEFANNQVRLDTVLSGAGGLSFRGGGTVGIGGATPL
GLKFNGTVPFGLLQGQLSSQGFVLTGNANADVSIGGTAAAPSVTGSITAGGARLVDVRRN
LAVDDLTVRITMDGRQAVIETLSGRLASGGQLSATGRIGIDPASGFPVDVAIKLGDVTYV
DGTLVTANVTGDLTVKGPLADIVLAGRVRINKANITIPQKLPASLSEIDIKHRNAPADVK
RMNADVQRDQGASGASRGIGLNLTIEAPGQLFVRGRGINAELGGSLTVTGTSSSPVVSGG
FELERGRMEILARRLDFSSAHIGFTGGLVPTVNLVAGSTAGTTEITVTVAGVASNPTVTF
ASSPALPQDEILAQLIFNRSMSNLSAVQIAQLAAAASQLAGGSSTGLLDSLRSKLGVDDL
DITTDAEGRAAVSAGKYLNDRTYIELKQDPETNGAKAVINLDVGRGVKLRGEAGSGGSAG
AGIFYEKEY
NT seq
4170 nt
NT seq
+upstream
nt +downstream
nt
atgacgaggttgtctcgaattctccgcgccattctccgctatgccggctacggccttgcg
gtgctgcttgtcattctggtcgcggttctgggcttcgtcggcttcacggatgcgggcgcc
cgcatggccgtttcctatgtggagaagcttgccgccgcaagcgggcaggtcatttccatc
agcgagccgtccgggctcctgacgggccggctgcgcgtaggttccgtcacccttggcgac
gacaagggcacctatgcggaaatccgcgacctcgccgtcgattggtcgccgctggagctc
ttgttcttcagcttcgatgcatctcgtgtctcggcgtcctcgatctcgctgctgcgcctg
ccggaatccaaggcggatgcacagccttccgatacgccgttcaagctgcccgtcgaagtc
catgtcgattcgctggcgatcccggaactcttcgtctcgggctccgtggccggccgtgat
cagcgcatcgtcgtctccggccgtggcgatgcgaccgcggagagtgtggccatcaagctt
tccgccaacgaagtggagcgcccggacgcacgactggctgccgatatcgtcttcaatccg
gccgagaacgtgctgcgccttgaaaccgatgtcgccgaaccgaagggcggcctgctcgcc
aatctgctcaaactgccgaacgagcccgccgtctccatccgcctgacgggtgacgggccg
ttgtcgcagtggaagggccgtctttccgccgcgctcgacggtacggagatgctgcgtgtc
gatggccgccacgatctttccgccaatgggctgcataccctgtcggtcaagggcggcggc
acgttcgatgcgttgatgccgccgcagttgcgaccgcttttcgccggcgagacgaacatc
gacctcgtcgctgccttcgacggttccgacatggtgcgcatcgagaagggcaacatcgcg
acaggtgcgatgacgcttgccgcctccggcgccgtgagcgcgacggggtccaacgatttc
aatgtgaagctcgacgggcgcgatggcccgatcgatttccgctggccgctcgccggtggc
gatgcccgcatcctgatcgacggcgccgacatttcgctcaccggcgcggcgaacgccgca
gccttgcgggcagatgtcgccgtggtatccgcggcgctgccggcgggtcgggtcgagaac
atccgcctttccgcccgtagcgatgcgttcaacgtgtccagccagtccggccgggtcgat
gtgacggtcgagaccggcgacatggctttcgccaatgcggatatcgaccgcatggtgaag
gggccggccaaggtcgtcgcaaccctgaacgtatcgccgacagagatcgccttcgatccc
gcaacactggaaagcgccagcatcggcggaacgctttcgggccgctacgggctcgaaagc
cgcgaggccgacgtcaatttccgtcttttcgcgctgcccgctgtcctgccgccggccttg
tccggcaagttcgatacgacgattgcgatggaagggcgtgttcagctggccggcaacggt
gcgctgcaactcaccggtctgcagctcaagtcggggacagccgaggcggccggtgatgtc
gcgctcgccgagggcaatctcgatgcgacgcttgccggcaaggtcttgaacctcggcaag
ctgctgggcgatgcctccggcgaggcggccttcgatgtttcggcgaaggggccggtcgat
gggctcgacgttgcggccaaggtcacatccagtggcgcgacactttcggggcgcacgctg
agcgatctcgtcgtcacgctcaacgggaaggccgttgcggacaggccctccggggagctg
acggcgacgggtgcgcttgatggacaggcgatcaacgtgcgttccagcatcacctcggaa
ggcaggcgcatctcggtgccggtgctggaagcggagatcggcgcgaacacgctgaagggc
tcgctggcgctgacgccggatttcatgcctgacggcacggtccgcttcaactttcccgat
ctcggactgcttgcggccatggccggccaaaaggcagccggcgatctctccggacaggtg
gagatcgcgacgaccaacggcaggacgtcggcaatcgttcaggcgagcggttccggtata
agccgcgatgcgatcagcatttccaagccgaccgtggacctcaccattaccgatctcgcc
acacttgcgatcaacggcacggttcgggccgagcgcatcgtttcgggcgggaaccgcgtc
gatgccctcagccttgatttctcgcgggaagggcaggcgacccggttcgatctcggtggt
cgtctcgacaatgcgccgctggtcgcgaaggggcaggtcgtccaacgtgccggcggtttg
gacgtcgccttgcagacgttcgaaggcgcgccgcgcggcatcgccctgaagctcgcaagt
ccgtccacgatcgctgtcgataacggcgttgcggttctcgacaagctcaccatccaggcc
ggaaccgggtcggttgcggtatcgggtcgggccggcgagacgctggacctgtcgctcggt
ctcaatgccgtgccggcggcgctcatcaacaatttcgcgccaggcctcggtgcggaaggt
gcgatcggcggcactgtgacggtcaagggcagggcggccgcgcctgtcgtcaactacgcg
ctcgactggaagggcgccgtcaccagccagacgcgtggcgcgggcatcggcgccgtcgat
atcaacgccaagggcgaattcgccaacaatcaggtccggctcgacacggtgctttcgggc
gcaggcgggctttccttccggggcggtggcacggtcgggatcggcggcgcgacgccgctt
ggcctgaagttcaatggcacggtgccgtttggattgttgcagggccagctttcgtcgcag
ggcttcgtgttgaccggcaatgccaatgccgatgtctcgataggcggcacggcggcagcg
ccttcggtgaccggcagcataacggccggcggtgcgcgtctggtcgatgtccggcgcaat
ctcgccgtggatgacctgacggtgcgcatcaccatggacggccggcaggccgtcatcgag
acgctgtccggcaggctcgcgagcggcgggcagctttcggccaccggccgtatcggcatc
gatccggcgagcggcttcccggtcgacgtggcgatcaagctgggcgatgtcacctatgtc
gacggcacgctggtcaccgccaatgtgaccggcgacctcaccgtcaaggggccgttggcc
gatatcgtgctggctggccgggtgcgcatcaacaaggcgaacatcaccattccgcaaaaa
ctgccggcttcgctgtcggagatcgatatcaagcatcgcaatgcaccggccgacgttaag
cgcatgaatgccgacgtgcagcgcgaccaaggcgcgagcggcgcctcacgcggcatcggc
ctcaacctcaccatcgaggcgccgggccagcttttcgtgcgtggccgcggcatcaatgcg
gagctgggcggcagcctcaccgtgacgggaacgtcgtcgtcgcctgtcgtgtcgggcggt
ttcgagcttgagcgcggccgcatggaaatcctggcgcgccggctcgatttctccagcgcg
catatcggctttacaggaggcctggtgccgaccgtcaacctcgtcgcgggaagcacggcc
ggcacgacggaaatcaccgtgaccgtggccggcgtcgccagcaacccgacggtgaccttc
gcctcctcgcctgcgctgccgcaggatgagatcctggcgcagctcatcttcaaccgctcc
atgtcgaacctctcggcggtgcagatcgcgcagcttgccgctgccgcaagccagctggcc
ggcggcagttcgaccggccttctcgacagcctgcgaagcaagctcggcgtcgacgatctc
gatatcacgacggatgcggagggccgcgcggccgtttcggccggcaagtatctcaacgat
cgcacctatatcgagctgaagcaggatccggagacgaacggcgccaaggccgtcatcaat
ctggatgtcggccgcggcgtcaagctgcgcggggaagccggcagcggcggcagtgcgggc
gccggtatcttctacgaaaaggaatactga
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