Shinella oryzae: K6301_13405
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Entry
K6301_13405 CDS
T08112
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
soj
Shinella oryzae
Pathway
soj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K6301_13405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
soj03400
]
K6301_13405
Enzymes [BR:
soj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
K6301_13405
DNA repair and recombination proteins [BR:
soj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
K6301_13405
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
UPA26324
LinkDB
All DBs
Position
2749146..2749796
Genome browser
AA seq
216 aa
AA seq
DB search
MHMIRTDADIAAGLVDLALLDARLFSVIDKAGPVPLRRLEPGYRGLAGIIVSQMVSRASA
DAIWRRLETAAGDITPHHVLGLSDEECRAIGLSRAKTDTLRRAAEAVDRGDLDLDAVCHL
DAPAATRTLTAIKGIGRWTADVYLLFCGGHPDIFPSGDIALQNAVAHALGLAVRPSPQEL
DGIAERWSPWRGVSARLFWAYYAREMRREVAPVLEG
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
ctgcacatgatcaggacggatgcggatatcgcagcaggtctcgtcgacctcgcccttctc
gacgcccgccttttcagcgtcatcgacaaggcggggcctgtgcctctgcggcggctggaa
cccggctatcgcggccttgccggcatcatcgtctcccagatggtgtcgcgcgcgagcgcc
gatgcgatctggcgccggctggagacggcggccggagacatcacgccccaccatgtgctc
gggctgtcggatgaggagtgccgggccatcggcctgtcgcgcgccaagacggatacgctg
cgccgcgcggcagaagccgtcgaccgcggcgatctcgacctcgatgccgtctgccatctc
gacgcaccggccgccacccgcactctcaccgccatcaagggcatcggccgctggacggcg
gacgtctacctgctgttttgcggcgggcatcccgatatctttccgtctggcgacatcgcc
ctgcagaacgccgtcgcccatgcgctcggcctcgccgtgcggccaagcccgcaggaactg
gatgggattgctgagcgatggtcgccctggcgcggcgtttcggcccggcttttctgggca
tattatgcccgggagatgcgccgggaggtcgctccggtgctcgaaggctga
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