Shinella oryzae: K6301_13670
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Entry
K6301_13670 CDS
T08112
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
soj
Shinella oryzae
Pathway
soj00020
Citrate cycle (TCA cycle)
soj00190
Oxidative phosphorylation
soj00650
Butanoate metabolism
soj00720
Other carbon fixation pathways
soj01100
Metabolic pathways
soj01110
Biosynthesis of secondary metabolites
soj01120
Microbial metabolism in diverse environments
soj01200
Carbon metabolism
Module
soj_M00009
Citrate cycle (TCA cycle, Krebs cycle)
soj_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
soj_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
K6301_13670 (sdhA)
00650 Butanoate metabolism
K6301_13670 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
K6301_13670 (sdhA)
00720 Other carbon fixation pathways
K6301_13670 (sdhA)
Enzymes [BR:
soj01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
K6301_13670 (sdhA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
DAO
Pyr_redox_2
Thi4
FAD_oxidored
FAD_binding_3
HI0933_like
Motif
Other DBs
NCBI-ProteinID:
UPA24185
LinkDB
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Position
complement(2801475..2803316)
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AA seq
613 aa
AA seq
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MAANSSPAANGKAYTYVDHYFDVIVVGAGGAGLRATLGMAEQGLKTACITKVFPTRSHTV
AAQGGIAASLVNMTPDCWQWHLYDTVKGSDWLGDVDAMQYLAMEAPKAVYELEHYGVPFS
RNAEGKIYQRPFGGHMQNYGEGPPVQRTCAAADRTGHAILHTLYGQSLRNNAEFFIEYFA
LDLIMSADGRCTGVVAWNLDDGTIHRFAAKMVVLATGGYGRAYFSATSAHTCTGDGGGMI
ARAGLPLQDMEFVQFHPTGIYGAGCLITEGARGEGGYLVNSEGERFMERYAPSAKDLASR
DVVSRCMTMEIREGRGVGKNKDHIFLHLDHLDPAVLHERLPGISESAKIFAGVDVTREPI
PVLPTVHYNMGGIPTNYWGEVLNADGQNPERIAPGLMAVGEAGCASVHGANRLGSNSLID
LVVFGRAAAIRAGEVIDRDEPVPALDIAACDRIMDRFDRLRYANGSTPTAVLRDKMQRTM
QEDAAVFRTQESLENGCKRITEIWKELPDIKVTDRSMIWNSDLVETLELENLMANAITTV
YSAEARKESRGSHAREDYVDGPFGGRDDVNWRKHTLAWVNEAGDVKLDYRPVHTDLIADG
IDPQKIAPKARVY
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgaactcctccccggcggccaacggcaaggcctatacctatgtggaccactac
ttcgacgtgatcgtcgtcggcgccggcggtgcgggcctgcgcgccacgctcggcatggcc
gaacagggtctcaagacggcctgcatcaccaaggtcttcccgacgcgttcgcacaccgtc
gccgcccagggcggcattgccgcctcgctcgtcaacatgacgcccgactgctggcagtgg
cacctgtacgataccgtcaagggctccgactggctcggcgacgtcgacgccatgcagtat
ctcgccatggaagcgccgaaggcggtctatgagctcgagcattacggcgtgcccttctcg
cgcaatgccgaaggcaagatctaccagcgcccgttcggcggccacatgcagaactatggc
gaaggcccgccggtgcagcgcacctgtgccgccgccgaccgtaccggccacgccatcctg
cacacgctctacggccagtcgctgcgcaacaatgcggaattcttcatcgagtatttcgcg
ctcgacctgatcatgtcggccgacggccgctgcaccggcgtcgtcgcatggaacctcgac
gacggcacgatccatcgcttcgccgccaagatggtggttctggcgaccggcggttacggc
cgcgcctacttctcggcgacctccgcacatacctgcacgggcgacggtggcggcatgatc
gcgcgcgccggcctgccgctgcaggacatggaattcgtgcagttccacccgaccggcatc
tacggcgcgggctgcctcatcaccgagggtgcgcgcggcgagggcggttatctcgtcaat
tccgaaggcgagcgcttcatggagcgttatgccccgtccgccaaggacctcgcctcgcgc
gacgtcgtctcgcgctgcatgacgatggaaatccgcgaaggccgcggcgtcggcaagaac
aaggaccacatcttcctgcatctcgaccatctcgatccggccgttctgcacgagcgcctg
ccgggcatttccgagagcgcgaagatctttgcgggcgtcgacgtgacgcgcgagccgatc
ccggtcctgccgactgtgcactacaatatgggcggcattcccacgaactactggggcgaa
gtgctcaatgccgacggccagaacccggagcgcatcgcgcccggcctcatggccgtgggc
gaagccggctgcgcttcggtgcacggcgcaaaccgcctcggttccaactcgctgatcgac
ctggtggtcttcggccgtgccgcggccatccgcgccggcgaggtcatcgaccgcgacgag
ccggtcccggcgctcgacatcgctgcctgcgacaggatcatggatcgcttcgaccgcctg
cgctacgccaatggcagcacgccgacggccgtgctgcgcgacaagatgcagcgcaccatg
caggaagacgccgccgtgttccgcacgcaggaatcgctggaaaacggctgcaagcgcatc
acggaaatctggaaggaactgcctgacatcaaggtcaccgaccgttcgatgatctggaat
tccgacctcgtcgagacgctggagctggagaacctgatggccaacgccatcacgacggtc
tatagcgccgaggcgcgtaaggaaagccgcggctcgcatgcccgcgaggactatgtcgac
ggcccgttcggcggccgcgacgacgtcaactggcgcaagcacacgctcgcatgggtcaac
gaggcgggcgatgtgaagctcgactatcgccccgtgcacaccgacctcatcgccgacggg
atcgatccccagaagatcgcgcccaaggcgcgcgtctactga
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