Shinella oryzae: K6301_14480
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Entry
K6301_14480 CDS
T08112
Name
(GenBank) autoinducer 2 import system permease LsrD
KO
K10557
AI-2 transport system permease protein
Organism
soj
Shinella oryzae
Pathway
soj02010
ABC transporters
soj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
K6301_14480
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
K6301_14480
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soj02000
]
K6301_14480
Transporters [BR:
soj02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
AI-2 transporter
K6301_14480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
MlaD
Motif
Other DBs
NCBI-ProteinID:
UPA24335
LinkDB
All DBs
Position
complement(2975067..2976080)
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AA seq
337 aa
AA seq
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MKKLIFRWETALLVMLVAELVIFGIINPRFLNVANLIYGTSDFVQIGIVALPLTLVIIAG
GIDVSFASVIGLAAIVFGVATFYGVPLLLSIALALVAGALCGLLNATVIHLSKIQPLVVT
LGSLYLFQGTATVASGLVGAGGYEGIGNFPDAFNAFGYAQILGLPAPLALFLVLALVLIV
LLHFTRFGRAVFLSGQSESAARFAGIPVGRVQTITYVITGVSAAIAGLVMSAYFGSARVD
LGSATLLPAVTAAVLGGASIYGGQGSILGTLIATFVIGYLQQGLQATGVPSQISSALSGG
LLVVAVALRHGSAMLADFIAVARQQKKSRAAVTSGGE
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagctgatcttccgctgggagaccgcgctcctcgtcatgctggtcgccgaactc
gtcatcttcggcatcatcaatccgcgcttcctcaatgtcgcgaacctgatctacggcacc
tcggatttcgtgcagatcggtatcgtcgccctgccgctcaccctggtcatcatcgccggc
ggcatcgatgtgtccttcgcctcggtgatcggccttgccgccatcgtcttcggtgtcgcc
accttctacggcgtgccgctgctgctctcgattgcgctggcgcttgtcgccggtgcgctc
tgcgggctgctcaacgctaccgtcatccacctgtcgaagatccagccgctcgtcgtgaca
ctcggcagcctctatctcttccagggcactgcgacggtcgcgtcgggtcttgtcggcgcg
ggcggctatgagggcatcggcaacttcccggatgccttcaacgccttcggctatgcccag
atcctcggcctgccggcgccgctcgcgctgttccttgtgctcgcgctggtgctgatcgtg
cttttgcacttcacgcgtttcggccgcgccgtcttcctgtccggccagtcggaaagtgcg
gcacgctttgccggcatcccggtcggacgcgtgcagaccatcacctatgtcatcaccggc
gtttcggccgccatcgccggtctcgtcatgtcggcctatttcggttcggcccgcgtggac
ctcggttcggcgacgcttctgccggcggtgacggccgccgtgcttggcggggcctccatc
tatggcggccagggctccatcctcggcacgctgatcgccaccttcgtgatcggctacctg
cagcagggcctgcaggccaccggtgtgcccagccagatttccagcgcactttcgggaggg
ttgctggttgtcgcggtcgcattgcgccacggaagcgccatgctagccgatttcatcgcc
gtcgcccggcaacagaaaaaatcccgggcggcagtcacttcaggaggagaatga
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