Shinella oryzae: K6301_14550
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Entry
K6301_14550 CDS
T08112
Name
(GenBank) ABC transporter ATP-binding protein
KO
K01996
branched-chain amino acid transport system ATP-binding protein
Organism
soj
Shinella oryzae
Pathway
soj02010
ABC transporters
soj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
K6301_14550
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
K6301_14550
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soj02000
]
K6301_14550
Transporters [BR:
soj02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
K6301_14550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
AAA_27
ABC_ATPase
SMC_N
NACHT
AAA_15
AAA_23
nSTAND1
RsgA_GTPase
MMR_HSR1
AAA_22
AAA_16
AAA_25
AAA_30
FtsK_SpoIIIE
AAA_28
NB-ARC
Dynamin_N
Motif
Other DBs
NCBI-ProteinID:
UPA24349
LinkDB
All DBs
Position
complement(2989158..2989868)
Genome browser
AA seq
236 aa
AA seq
DB search
MALLETHGLTAFYGDFQALFGVDLALDEGETVAVIGANGAGKSTLLRSISGLIRNVPGQI
RFDGREIGALAAPDVLQLGIAMVPEGRRLFPSLSVEENLLIGKYGRAGNGAWSLDGIYEL
FPVLKERRHQPGTALSGGQQQMVAIGRGLMSNPRVLLCDEVSLGLAPVVVRDIYAAFPKI
RATGASIVIIEQDIGQALKVADRVYCMMEGRVTLSGTPATLSREDIHAAYFGAHAR
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgctcgagacccatggcctgacggccttctatggcgacttccaggccctgttc
ggcgtcgatctcgcactcgatgaaggcgagacggtcgccgtgatcggcgccaacggtgcg
ggcaaatcgaccctgctgcgctcgatttccggcctcatccgcaatgtgccgggacagatc
cgcttcgatgggcgggagatcggcgcgcttgccgcgcccgatgtcctgcaactgggcatc
gccatggtgccggaaggccgccgtctctttccatcgctttccgtcgaggagaacctgctg
atcggcaaatacggccgcgccggcaacggcgcctggtcgctcgacggcatctatgaactc
ttccccgtgctgaaggagcgccgtcaccagcccggcaccgcgctgtcaggcgggcagcag
cagatggtcgcgatcggccgcgggctgatgtccaatccgcgcgtgctgctctgcgacgag
gtgagccttgggctggcccccgtcgtcgtcagggacatctacgcggcctttccgaagatc
cgcgcgacgggcgcatccatcgtcatcatcgaacaggatatcggccaggcgctgaaggtc
gccgaccgggtctattgcatgatggagggacgggtgacgctttcgggaacgccggcaacg
ctgagccgcgaggatatccacgccgcctatttcggagcgcatgcgcgatga
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