Shinella oryzae: K6301_14560
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Entry
K6301_14560 CDS
T08112
Name
(GenBank) ABC transporter substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
soj
Shinella oryzae
Pathway
soj02010
ABC transporters
soj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
K6301_14560
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
K6301_14560
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soj02000
]
K6301_14560
Transporters [BR:
soj02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
K6301_14560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
TAT_signal
ANF_receptor
ABC_sub_bind
Peripla_BP_4
DUF7927
Motif
Other DBs
NCBI-ProteinID:
UPA24351
LinkDB
All DBs
Position
complement(2990591..2991868)
Genome browser
AA seq
425 aa
AA seq
DB search
MLTRRDLLKSAAATGALAATSGLAMPALAQGAPIKLGYVSPQTGPLAAFAEADKFIIDGF
LAATKAAGLNYEVVVKDSQSNPNRAAEVAKELIVSDEVNLVLVASTPETTNPVATTCEAE
EVPCISTAAPWQPWFIGQQANPGDPASWKPFNSVFHFFWGLEDVIAVYTNMWEQLETNKK
VGGLFPNDGDGNAWGDKAVGFPPVLEKLGYSLNDPGRYQNLTDDFSAQINAFKSDGSDVI
TGVMIPPDFTTFWNQAQQQGFKPKVASIGKAILFPQAVEALGKNGHNLSCEVWWSANHPF
KSSLTGQSAGELAEGFTKATGRPWTQPIGFVHALFEVAVDVMKRADPTDSEAVIAAIAAS
NIETIVGKVAWDGAHLPPFAGKNVAKTPLVGGQWRLKDGGGYDLVIVDNQTAPSIPTGGK
MEVIG
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgcttacgagacgtgacttgctgaaatccgcagccgccacgggcgcattggcggcgaca
tccggcctcgccatgccggccctggcccagggcgcgccgatcaagctcggctatgtcagc
ccgcagaccggaccgctcgccgcgttcgccgaggccgacaaattcatcatcgacggcttc
ttggccgcgaccaaggcggccggcctgaactacgaagtggtggtgaaggacagccagtcc
aacccgaaccgcgccgccgaggtcgccaaggagctgatcgtcagcgacgaggtcaatctc
gtgctcgtggcctcgacgcccgagacgaccaaccccgtggccacgacctgtgaggcggag
gaggtgccgtgcatctcgacggccgcgccctggcagccctggtttatcggccagcaggcc
aatccgggcgacccggcctcgtggaagccgttcaacagcgtcttccatttcttctggggg
ctggaagacgtcatcgctgtctacaccaatatgtgggaacagcttgagaccaacaagaag
gtcggcggcctgtttcccaacgacggcgacggcaacgcctggggcgacaaggccgtgggc
ttcccgccggtcctggaaaagctcggttacagcctcaacgatcccggccgctaccagaac
ctgaccgacgacttttccgcccagatcaatgccttcaagtccgacggcagcgatgtcatc
acgggcgtgatgatcccgcccgacttcaccaccttctggaaccaggcgcagcagcagggc
ttcaagcccaaggtcgcgtcgatcggcaaggcgatcctgtttccgcaggcggtggaagcg
ctcggcaagaacggccacaacctgtcctgcgaggtctggtggtcggcgaaccatccgttc
aaatcgtcgctgaccggccagagcgccggggagctcgccgagggcttcacgaaggccacc
ggccggccctggacccagcccatcggcttcgtccatgcgctgttcgaggtcgccgtcgat
gtgatgaagcgcgccgatccgacagacagcgaagcggtgattgccgccatcgccgcctcc
aatatcgagacgatcgtcggcaaggtggcctgggatggcgcccacctgccgccctttgcc
ggcaagaatgtcgccaagacgccgctggtcggcggacagtggcgcctcaaggacggcggc
ggctacgacctcgtcatcgtcgacaaccagacggcgcccagcattccgaccggcggcaaa
atggaagtgatcggctga
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