Shinella oryzae: K6301_14815
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Entry
K6301_14815 CDS
T08112
Name
(GenBank) MFS transporter
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
soj
Shinella oryzae
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
soj03009
]
K6301_14815
Enzymes [BR:
soj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
K6301_14815
Ribosome biogenesis [BR:
soj03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
K6301_14815
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
Methyltransf_25
FtsJ
Methyltransf_31
RsmF-B_ferredox
DUF5969
Motif
Other DBs
NCBI-ProteinID:
UPA24395
LinkDB
All DBs
Position
complement(3041331..3042737)
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AA seq
468 aa
AA seq
DB search
MNDENRRSKPHPNRHRGTRGPKPAPAADHVEKPGLRARQAAAKILAAVVDRRTPLDGMLD
TENGNPAYRQLNDADRALVRAIINTALRHLPRIEAILDTLVGTPLPDGARALHHVLAVAA
AQILYLDVPDHSAVDLAVEQAQLDPRNRRFASLTNAVLRRLSREKATHLAATQALPVIPA
WFYERLISVYGEAHAASIADAVLEPSAIDLTVKSDPKGWADKLGGLVLPTGSVRLPAASG
AIPALEGFEAGEWWVQDAAASLPARLFGDLAGKHVADLCAAPGGKTAQLVLAGGAVTALD
QSGNRLRRLESNLARLGLSATTLEANMADFRPETLFDAVLLDAPCSSTGTIRKHPDVLWT
KGPEDIEKLARLQERLLRHALTLVKPGGDLVFSNCSLDPAEGEDMIDRVLADNPDWRLIP
VDAADWPGLEEAISPRGEFRTTPAMLPATASHAGGVDGFYAVRLRRKG
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
ttgaacgacgaaaatcgcagaagcaaaccgcatcccaaccggcatcgtggcacacggggc
ccgaaacccgcgccggccgcggatcacgtcgaaaaaccgggcctgcgtgcccggcaggcg
gcagccaagatccttgcggcggtggtcgaccgcaggacgccgctcgacgggatgctggat
accgaaaacggcaatccggcctatcggcagctgaacgacgccgaccgcgcgctggttcgc
gctatcatcaacacggcgctgcgccatctgccgcgcatcgaggcgatcctggatacgctt
gtcggcacgccgctgccggacggcgcccgcgcgctgcatcatgtgctggcggtggccgct
gcgcagatcctctatctcgatgtgcccgatcattccgccgtcgacctcgcggtggagcag
gcgcagctcgatccgcgcaaccgccgtttcgccagtctcaccaatgccgtgctgcgccgc
ctgtcgcgcgagaaggccacgcatcttgcggccacgcaggcgctgccggtcattccggcc
tggttctatgagcggctgatatcggtctacggcgaggcgcatgccgccagcatcgcggat
gccgtgctggaaccgtcggccatcgacctcaccgtcaaatcggacccgaagggctgggcc
gacaagctgggcgggctcgtcctgccgaccggctccgttcgcctgcctgccgcctccggc
gccattccggcgctcgagggtttcgaggcgggtgaatggtgggtgcaggacgccgctgcg
agcctgccggccaggcttttcggtgacctcgcgggcaagcatgtcgcggatctgtgcgcc
gcaccgggcggcaagaccgcgcagcttgtgctggccggtggcgcggtgacggcgctcgac
caatcgggcaaccggcttcggcggctggaaagcaatctggcgcggcttggcctttccgcg
accacgctcgaggccaatatggcggatttccgccccgagacgctgttcgatgccgtcctg
ctcgatgcgccctgctcctcgacgggcacgatccgcaagcatcccgacgtgctctggacc
aaggggccggaggatatcgaaaagctggcacgcctgcaggaacgcctgctgcgccacgcc
ttgacgctggtgaagccgggcggcgatctcgtcttctccaactgctcgctcgatcccgcc
gagggcgaggacatgatcgaccgggtgctggcggacaatccggactggcggctcattccc
gtcgacgcggcggactggccgggcctggaggaggcgatttcgccgcgcggcgaattccgc
accacgcccgccatgctgcctgcgaccgccagtcacgccggcggcgtcgacggcttctat
gcggtgcggctgcgcagaaagggctga
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