Shinella oryzae: K6301_15000
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Entry
K6301_15000 CDS
T08112
Name
(GenBank) ABC transporter substrate-binding protein
KO
K10439
ribose transport system substrate-binding protein
Organism
soj
Shinella oryzae
Pathway
soj02010
ABC transporters
soj02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
K6301_15000
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
K6301_15000
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soj02000
]
K6301_15000
Transporters [BR:
soj02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
K6301_15000
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_3
Peripla_BP_1
Motif
Other DBs
NCBI-ProteinID:
UPA24431
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All DBs
Position
3080628..3081617
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AA seq
329 aa
AA seq
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MSIVRSLLTRRAFTALAGAAVLATMTPAQSFAQEVTIPIIVKDTTSFYWQIVLAGARQAG
KDLGVKVPELGAQSEADINGQITILENAVAGAPAAVVISPTEFKALGKPIDEAAKSVPII
GIDSSADSKAFTSFLTTDNVQGGRIAADGLAAAIKAATGKDEGDIAIITSLPGVGSLDQR
REGFLDEVKTKYPGLKVVADKYADGQATTGLNIMTDLITANPNLVGVFASNLIMAQGVGQ
AIAENKLGDKIKVIGFDSDEKTVGFLKEGVLAGLVVQDPYRMGYDGVKTALAVSKGEKVE
TFVDTGANLVTKDNMADPKIDALLNPKVN
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgagcattgtaagatcgcttctgacccgccgcgccttcaccgcgcttgcgggtgccgca
gtcctcgccaccatgacgcctgcgcagtcgttcgcgcaggaagtcaccattccgatcatc
gtgaaggacaccacctccttctactggcagatcgtgctggccggcgcgcgccaggccggc
aaggacctcggcgtcaaggtgccggaactcggcgctcagtcggaagccgacatcaacggc
cagatcaccattctcgaaaacgcggtggccggcgcaccggccgccgtggtcatttcgccc
acggagttcaaggcgctcggcaagccgatcgacgaggcggcgaagtccgttccgatcatc
ggcatcgactcgtcggcggattccaaggccttcacctcgttcctgacgacggataacgtc
cagggcggccgcatcgccgccgatggcctcgccgccgccatcaaggccgccaccggcaag
gacgagggcgacatcgccatcatcaccagccttccgggcgtcggctcgctcgaccagcgc
cgcgaaggcttcctggatgaggtgaagaccaagtatccgggcctcaaggtggtcgcggac
aaatatgcggacggtcaggccacgaccggcctcaacatcatgaccgacctcatcaccgcc
aatccgaacctcgtcggagtcttcgcctccaacctcatcatggcgcagggcgtcggccag
gcgatcgcggaaaacaagctcggcgacaagatcaaggtcatcggcttcgacagcgacgaa
aagaccgtcggtttcctcaaggaaggcgtgctggccggcctcgtcgtgcaggatccctac
cgcatgggctatgacggcgtgaaaacggcgctcgccgtctccaagggcgagaaggtcgaa
accttcgtcgataccggcgccaacctcgtgaccaaggacaacatggccgatcccaagatc
gacgccctgctgaacccgaaggtcaactga
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