Shinella oryzae: K6301_15550
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Entry
K6301_15550 CDS
T08112
Name
(GenBank) type II and III secretion system protein family protein
KO
K02280
pilus assembly protein CpaC
Organism
soj
Shinella oryzae
Pathway
soj02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
K6301_15550
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
soj02044
]
K6301_15550
02035 Bacterial motility proteins [BR:
soj02035
]
K6301_15550
Secretion system [BR:
soj02044
]
Type II secretion system
Tight adherence (Tad) export apparatus
K6301_15550
Bacterial motility proteins [BR:
soj02035
]
Pilus system
Pilus assembly proteins
K6301_15550
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Secretin
T2SS-T3SS_pil_N
BON
Motif
Other DBs
NCBI-ProteinID:
UPA24530
LinkDB
All DBs
Position
complement(3205884..3207359)
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AA seq
491 aa
AA seq
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MFALSKTFRASVAGGLTFCLAFSGLPAALLTGQVIATAEAASASIIRIQNAGPGARKTIS
LGLNKAVVIDLPSDAHDILVADPVKADAVTRTSRRIYLFGKEVGQTNIFVFGPGGEEIVS
IDLNVERDVSSLQANLRRFIPDSDIQVEIISDNIVLSGSVRTPQDATQAVNLAQIFLKGG
EATTRTVVSQGNNGDAAIFGEGRQASQVVNMLQVQGEDQVTLKVTVAEIRREVLKQLGFD
NTFSRIAGASGSNLDVLSFNTAASGLSGTVAGNVGKLGIESVVNALEQAKAIRTLAEPTL
TAISGQAATFNSGGERLYAVSDGNGGYTTTTYQYGISLGFTPTVLSSGRISLRIQTKVSE
PVAGASGAEYRRRDAETVVELPSGGSIALAGLIRDDVQQSMNGTPVASKVPIFGALFRQK
SIERNETELVIIATPYLVKPVNRNALARPDDNFNPANDAASVFLGQVNQIYGRKSNLPAQ
RYEGSVGFIYK
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgcactctcaaagacttttcgggcttctgtcgccggcggactgacattctgcctg
gccttttcgggcctgcctgccgccctgctgacggggcaggtcatcgccacggccgaggcg
gccagcgcgtcgatcatccgcatccagaatgccggcccgggcgcgcgcaagacgatcagt
ctcggcctcaacaaggcggtcgtcatcgacctgccttccgacgcgcatgacattctcgtc
gccgacccggtgaaggcggatgccgtgacgcgcacgtcgcgccgcatctatctcttcggc
aaggaagtcggccagaccaacatcttcgtcttcggacccggcggcgaggaaatcgtcagc
atcgacctcaatgtcgagcgcgatgtctccagccttcaggcgaaccttcgacgcttcatc
ccggattccgacatccaggtcgagatcatctcggacaatatcgtcctgagcggcagcgtg
cgcacgccgcaggatgccacgcaggccgtcaacctcgcgcagatcttcctcaagggcggt
gaggcgacgacgcgaacggtcgtgtcgcagggcaacaacggcgatgccgcgatcttcggc
gaaggccgccaggcttcgcaggtcgtcaacatgctccaggtccagggcgaggaccaggtg
acgctgaaagtcaccgtggcggaaatccgccgcgaggttctcaagcagctcggcttcgac
aacacgttcagccggatcgccggcgcgtccggctccaatctcgacgttctctccttcaat
acggcggcgagcggcttgagcggaacggtcgccggcaatgtcggaaagctcggcatcgag
tccgtcgtgaacgcgctggagcaggccaaggcgatccgcacgctggccgagccgacgctg
acggccatctccggacaggccgcaacattcaattcgggtggtgagcgcctttacgcggtc
tccgacggcaacggcggatacacgacgacgacctatcagtatggcatttcgctcggcttc
acgccgacggtcctgtcttcgggacgcatcagcctgcgcatccagaccaaggtttccgaa
ccggttgcgggcgcgagcggtgccgaataccgccgccgcgatgccgaaaccgtcgtcgaa
ttgccctcgggcggttccatcgcgctcgccggcctgatccgcgacgacgtgcagcagagc
atgaacggcacgcctgtggcttccaaggttccgatcttcggcgcgctgttccgtcagaaa
tccatcgagcgcaacgagaccgagctggtgatcatcgcgacgccctatctcgtcaagccg
gtgaaccgcaacgcgctggcgcggccggatgacaacttcaacccggccaatgacgcggca
agcgtcttcctcggccaggtcaaccagatctacggcaggaagagcaacctgcccgcccag
cgctacgaaggcagcgttggcttcatctacaaatga
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