Shinella oryzae: K6301_16245
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Entry
K6301_16245 CDS
T08112
Name
(GenBank) substrate-binding domain-containing protein
KO
K10439
ribose transport system substrate-binding protein
Organism
soj
Shinella oryzae
Pathway
soj02010
ABC transporters
soj02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
K6301_16245
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
K6301_16245
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soj02000
]
K6301_16245
Transporters [BR:
soj02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
K6301_16245
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Peripla_BP_6
PucR
ANF_receptor
Motif
Other DBs
NCBI-ProteinID:
UPA27134
LinkDB
All DBs
Position
pZ25:6268..7185
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AA seq
305 aa
AA seq
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MTCRQMCRIAMLGGTVFAAPVAASAQQVEIGIAQPNLEHPYRVGGIERAKAWGAEHPDVK
LTIVDGRRDSATQLSGVEDLITRHVSAVVLSPNDSKALAPIADAAKRANVPLIIFDRKLD
VPETDFAAFIGSDNIEMGRVAARFVIEKIGEEGKVIQLEGTPGASATVDRKQGFEEEMAK
HPGITVVSYVGHYRLQEAVAAMEDAVTAHRDVKAVFAHNDTMAMGAAQVLEEQRLEGVTT
VGMDGAKEGCEGVASGRLTGSVYYPTMFPESLDLAMKVLAGETVEKMTFLDTPMITKETH
DTYCK
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgacttgcagacagatgtgtcgtatcgcgatgctgggcggaacggtgttcgccgcaccg
gttgccgcaagcgcgcaacaggtggagatcggcattgcacagccgaacctcgaacatccc
taccgcgtgggcggtatcgagcgggccaaggcctggggcgccgagcatccggatgtgaag
ctaacgatcgtcgatggccgccgtgacagcgcgacccagctttcgggcgtcgaagacctg
atcacccgtcatgtctcggcagtcgtcctgtccccgaacgattccaaggcactagcaccg
atcgccgatgccgccaaacgcgccaacgtcccgctgatcatcttcgaccgcaagctcgac
gtgccggaaacggatttcgcggccttcatcgggtccgacaatatcgagatgggccgcgtc
gccgcccgcttcgtcattgagaaaatcggcgaggagggcaaggttatccagctcgaagga
acgcctggagcgtccgcgactgtcgatcgcaagcagggcttcgaggaggaaatggccaag
catccgggcatcacggtcgtctcttatgttggtcattaccgtttgcaggaagccgtggcg
gcgatggaagacgccgtgaccgcgcatcgcgacgtgaaggccgtcttcgcacacaatgac
acgatggcgatgggtgcggcgcaagtgctggaggaacagcggcttgaaggcgttaccacc
gtcggtatggacggtgcgaaggagggttgcgagggtgtcgcctcaggccggctgacgggt
tcggtctactaccccaccatgttcccggaatcgctcgaccttgcgatgaaggtacttgcc
ggcgagacggtcgagaagatgaccttcctcgacacgccgatgatcaccaaggaaacgcac
gacacctactgcaaataa
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