Shinella oryzae: K6301_16325
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Entry
K6301_16325 CDS
T08112
Name
(GenBank) IclR family transcriptional regulator
KO
K19333
IclR family transcriptional regulator, KDG regulon repressor
Organism
soj
Shinella oryzae
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
soj03000
]
K6301_16325
Transcription factors [BR:
soj03000
]
Prokaryotic type
Helix-turn-helix
IclR family
K6301_16325
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
IclR
HTH_IclR
MarR_2
HTH_24
HTH_Crp_2
TrmB
HTH_11
HTH_43
HTH_20
HTH_AsnC-type
Rrf2
HTH_23
HTH_27
TFIIE_alpha
RP-C
HTH_9
HTH_36
Motif
Other DBs
NCBI-ProteinID:
UPA27149
LinkDB
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Position
pZ25:complement(22329..23141)
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AA seq
270 aa
AA seq
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MTEKHENVSGDSEIQAPAETREAGAKSLRKMALVLDCFTRLHPSLTVADLSERTGMPRTT
VHRIVASLREVGMLDQDGRRQNYRLGLKMFHYGSSVIASLDTPRRAHPHIAKLQLVTGEI
IHFHMFDGSQMVCVEREEMGTSRLTTLTTIEAAPTYCTSVGKAFLAFQDESLVRRIAAEE
GLRSYTPKTITNLKALLEELALVRDRGYAIDDEENQLGVRCIGAPVRDAAGRVFASVSVS
GPAERMPDARLTGLAPLVIQTAADISDALS
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaaagcacgaaaacgtaagcggggacagcgagatccaggcgcctgcggagacg
cgggaggcaggtgcaaagtcgctgcgcaaaatggcgctggtgctcgactgtttcacacgc
ctgcatccgagccttaccgtcgccgatctttccgaaaggaccgggatgccgcgcaccacc
gtccaccggattgtcgcctccctgcgcgaggtgggcatgctcgaccaggatggtcgccgg
cagaactatcgccttggcctgaagatgtttcactacggcagcagcgtgattgccagtctt
gacacaccgcgaagggcccatccccacatagcgaagctgcagctggtgaccggtgagatc
atccatttccacatgttcgacggtagccagatggtctgcgtcgagcgcgaagaaatgggc
acttcacgcctgacgactctcacgacaatcgaggccgcaccgacctactgcacgagtgtc
ggcaaggcctttctcgcatttcaggatgagagcctcgtgcgacggatagcggcagaagaa
gggctgaggtcctacacgccgaagactatcactaacctgaaggcgcttcttgaggaactc
gcgttggtccgcgatcgtggctacgcgatcgatgatgaggagaatcagcttggcgttcgt
tgcatcggcgcgccggtgcgcgatgcggccggccgcgttttcgcatccgttagcgtgtcc
gggcccgccgagcgcatgccggacgcgcgcctgacaggccttgcacctcttgtaatccaa
acggcggcagatatttcggatgctttgtcgtaa
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