Shinella oryzae: K6301_16395
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Entry
K6301_16395 CDS
T08112
Name
(GenBank) DctP family TRAP transporter solute-binding subunit
KO
K11688
TRAP-type transport system periplasmic protein
Organism
soj
Shinella oryzae
Pathway
soj02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
K6301_16395
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soj02000
]
K6301_16395
Transporters [BR:
soj02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
K6301_16395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
Motif
Other DBs
NCBI-ProteinID:
UPA27161
LinkDB
All DBs
Position
pZ25:36258..37259
Genome browser
AA seq
333 aa
AA seq
DB search
MFRINRFTATALLFAGLAASSAAAADLRAGTSMAATHPSAQVLTKLSELVKERSGGNLNI
TVYTDGTLGNDGQMQQQVQSGTQDISTANAAGLAAQVKEMAVVEFPFIYRNSDEFYTVLG
GEMGKELADKLYEKGWVALGFSHNGFRHATNSKHPIEKWEDFAGLKIRVIPNAMYIDMFS
ALGANPTPMPVSEVYAALETGAVDAQEAPFAQINAMRIFEVQKYMSTTGHAVNSEVIVMS
RKTYDAMSPEDQKLVVEAGRDAVEWKRQQFQEMEAGLAKAIEEGGMTINAVEPAELARMA
EKMQPVIAKHAALAGTDFTERYIKAIEAGRTGN
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgcatcaaccgctttaccgccacggctctgctctttgcgggtctcgctgcgtcc
agtgccgctgcggccgatcttcgcgccggcaccagcatggccgccacccacccgtctgcg
caggtgctgaccaagctttccgaactggtcaaggaacgcagcggcggcaatctcaacatc
acggtctacaccgacggcacgctcggcaatgacggtcagatgcagcagcaggtgcagtcc
ggcacgcaggatatttccacggccaatgccgctggcctcgcggcccaggtcaaggagatg
gccgtcgtcgagtttccgttcatctatcgtaactccgacgaattctacaccgtactcggc
ggcgagatgggcaaggagctcgccgacaagctctacgagaagggctgggtcgcgctcggc
ttttcgcataatggcttccgccatgcgaccaacagcaagcatcccatcgagaagtgggag
gatttcgcggggctgaaaatccgcgttattccgaacgccatgtacatcgacatgttctcc
gcgcttggcgccaacccgacgccgatgccggtctcggaggtctacgccgcgctcgagacg
ggtgcggttgacgcgcaggaggcgcccttcgcgcagatcaacgccatgcgcatcttcgaa
gtacagaaatacatgagcacgaccggccatgcggtaaactccgaagtcatcgtcatgagc
cgcaagacctatgacgcgatgtcgccggaagatcagaagctggtcgtcgaggcgggcagg
gatgccgtggagtggaagcgccagcaattccaggaaatggaagccggcctcgccaaagcg
atcgaagagggaggtatgacgatcaacgccgtcgagcccgccgaactcgcccgcatggct
gagaagatgcagcccgtcatcgcgaagcatgccgcgcttgccggcacggacttcactgag
cgttacatcaaggccatcgaggccggccgcaccggaaattga
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