Shinella oryzae: K6301_16425
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Entry
K6301_16425 CDS
T08112
Name
(GenBank) IclR family transcriptional regulator
KO
K19333
IclR family transcriptional regulator, KDG regulon repressor
Organism
soj
Shinella oryzae
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
soj03000
]
K6301_16425
Transcription factors [BR:
soj03000
]
Prokaryotic type
Helix-turn-helix
IclR family
K6301_16425
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
TrmB
HTH_24
GAF_2
Rrf2
HTH_Crp_2
HTH_20
HTH_11
GAF
DUF742
DUF4423
Cullin
HTH_9
HTH_46
HTH_47
DUF2250
wHTH-PRTase_assc
HTH_43
Motif
Other DBs
NCBI-ProteinID:
UPA27167
LinkDB
All DBs
Position
pZ25:42258..43061
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AA seq
267 aa
AA seq
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MTTQNRERDADRNSSQMLSFSKMLSVLDCFSRDDRSLTVLEISKRTKLPRTTVHRIVGSL
KALGLIDQDRDREKYRLGLKLFELGNTVLANMDVQREASESMATLVNKTGQSVHLGVFDG
FEIVMVERADSKIGQLNRVVTLESAAAYCSATGKAALAFQPQAVVDRIIQHGFTALTPNT
ITSGKQLMDELELIRTRGYSIDDAEYEEWRRCVAAPIRNATGRVFAAISVTGKKEEFTDA
TVRQYASLVIAQADQISRRLGYEREQD
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgacgacccaaaaccgggagagggatgccgaccgcaattccagccagatgctctccttc
tcgaagatgctgtccgtactggactgtttttcgcgggatgaccgttcgctgacggtgctg
gagatatccaagcgaaccaagttgccgcgcacgacggtccaccgaatcgtcggttccctg
aaggcgctgggcctcatcgatcaggaccgggaccgggagaaataccggctcggcctgaag
ctcttcgaactcggcaataccgtgctggccaacatggatgtgcagcgcgaggcgagcgaa
agcatggctaccctcgtcaacaagaccgggcagtccgtgcatctcggcgtgttcgacggg
ttcgaaatcgtcatggtcgagcgggccgattcaaagatcggccagctcaatcgtgtcgtg
acgctggagagcgcggccgcctattgcagtgcgaccggcaaggccgccctcgcattccag
cctcaggccgtcgtggatcgcatcatccagcacggttttaccgcattgacgccgaacacc
atcaccagtggcaagcagttgatggacgagctcgaattgatccgcacgcgcggctactcg
atcgatgacgcggaatacgaggagtggcgccgctgtgtcgccgcacccattcgcaacgcc
acggggcgtgtcttcgcggccattagcgtgaccggcaagaaggaagaattcacggacgcc
acggtccggcaatacgcatcgctcgtcatcgcacaggctgaccagatttcccgtcggctc
ggctatgaacgggagcaggattga
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