Shinella oryzae: K6301_16455
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Entry
K6301_16455 CDS
T08112
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
soj
Shinella oryzae
Pathway
soj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
K6301_16455
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soj02000
]
K6301_16455
Transporters [BR:
soj02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
K6301_16455
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Ortholog
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GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA
AAA_22
SMC_N
Rad17
AAA_16
AAA_25
Zeta_toxin
nSTAND3
AAA_28
AAA_14
Motif
Other DBs
NCBI-ProteinID:
UPA27172
LinkDB
All DBs
Position
pZ25:48446..49543
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AA seq
365 aa
AA seq
DB search
MTVVGARLNKGLVLTGIHKSYGKVAAVKNLDLHVDDGELVALLGPSGCGKTTTLRMVAGF
ETPDAGTIEIDGEEISALPPHKRRLGMVFQNYSLFPHRTVAENIGFGLRMAGMAKSARDA
KINEMLDLVQLQGRGDVYPSKLSGGQQQRVALARSLVVNPKVLLLDEPLGALDKSLRESM
QFEIRGMQQRLGITALLVTHDQEEAMSMADKVAVMNGGRILQIGAPADIYDRPKSRFVAE
FLGASNIYEGHVSDDGGSLVTPGPQGPVRLHLPEAQKAGQFLLLSVRPERMVLTPGEAPA
GLAARVVGAVFRGNYAAYQVEVPALGRELFVYRQADGPLGSTTYHLGQAVTLDWAAQDGV
IVSAE
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgacagtagtcggagcccggctcaacaagggactggtgctgactggaatccataaatcc
tatggcaaggtcgcggctgtcaagaatttggacttgcatgtcgatgacggcgaactcgtc
gcattgctcggcccgtccggctgcggcaagacgacgacgctgcgcatggtggcagggttc
gagaccccggatgccggaacgattgagatcgacggcgaggaaatttcggcactgccgccg
cacaagcgtcgtctcggcatggtctttcagaactacagccttttcccgcatcggacggtt
gccgaaaacatcggtttcggcctgcgcatggccgggatggcgaaatccgcccgtgatgcg
aagatcaatgagatgctggacctcgtacagctgcaaggcaggggtgatgtctacccgtca
aagctctctggcggccagcagcagcgtgtcgcgctggcgcgttcgcttgtcgtcaatccc
aaggtcctgctgcttgacgagccgctgggtgcgctcgacaagtcgttgcgtgagagcatg
cagttcgaaatccgcggcatgcagcagcgcctcggcatcaccgctcttctcgtgacacat
gaccaggaagaggccatgtcgatggccgacaaggtcgccgtcatgaacggtgggcggatc
ctgcagatcggtgctccggcagatatctacgatcggccgaaaagccgcttcgttgcggag
tttctcggagcctcgaacatatatgaaggccacgtcagcgatgacggcggaagcctcgtt
acgcccggtccgcaggggcccgtaaggctgcatctgcccgaagcacagaaggccggtcag
tttctgcttctctcggttcgcccggagcgcatggtgctgacacccggcgaggcaccggct
ggccttgccgcgcgtgtcgtcggcgcggtgtttcgcggaaattatgctgcctaccaggtc
gaagtgccggcgctcggtcgggaactcttcgtttaccggcaggccgacggaccgctcggc
tccaccacctatcatctcgggcaggccgtgacgctcgactgggcggcgcaggacggcgtc
atcgtgagcgcggagtaa
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